CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005796
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA-binding motif, single-stranded-interacting protein 1 
Protein Synonyms/Alias
 Single-stranded DNA-binding protein MSSP-1; Suppressor of CDC2 with RNA-binding motif 2 
Gene Name
 RBMS1 
Gene Synonyms/Alias
 C2orf12; MSSP; MSSP1; SCR2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
236KKRQNPNKYIPNGRPubiquitination[1]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication. 
Sequence Annotation
 DOMAIN 62 135 RRM 1.
 DOMAIN 141 226 RRM 2.
 MOD_RES 208 208 Phosphothreonine.  
Keyword
 3D-structure; Alternative splicing; Complete proteome; DNA replication; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 406 AA 
Protein Sequence
MGKVWKQQMY PQYATYYYPQ YLQAKQSLVP AHPMAPPSPS TTSSNNNSSS SSNSGWDQLS 60
KTNLYIRGLP PHTTDQDLVK LCQPYGKIVS TKAILDKTTN KCKGYGFVDF DSPAAAQKAV 120
SALKASGVQA QMAKQQEQDP TNLYISNLPL SMDEQELENM LKPFGQVIST RILRDSSGTS 180
RGVGFARMES TEKCEAVIGH FNGKFIKTPP GVSAPTEPLL CKFADGGQKK RQNPNKYIPN 240
GRPWHREGEV RLAGMTLTYD PTTAAIQNGF YPSPYSIATN RMITQTSITP YIASPVSAYQ 300
VQSPSWMQPQ PYILQHPGAV LTPSMEHTMS LQPASMISPL AQQMSHLSLG STGTYMPATS 360
AMQGAYLPQY AHMQTTAVPV EEASGQQQVA VETSNDHSPY TFQPNK 406 
Gene Ontology
 GO:0005634; C:nucleus; NAS:UniProtKB.
 GO:0003690; F:double-stranded DNA binding; NAS:UniProtKB.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; NAS:UniProtKB.
 GO:0003697; F:single-stranded DNA binding; NAS:UniProtKB.
 GO:0006260; P:DNA replication; NAS:UniProtKB.
 GO:0006396; P:RNA processing; TAS:ProtInc. 
Interpro
 IPR002343; Hud_Sxl_RNA.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS
 PR00961; HUDSXLRNA.