CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044393
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nuclear nucleic acid-binding protein C1D 
Protein Synonyms/Alias
  
Gene Name
 C1D 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
85SRNELLQKLDPLEQAubiquitination[1]
158GAASRFVKNALWEPKubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 180 AA 
Protein Sequence
MPSPSVSTSA ASVLEGVCGR ARSTYRTPEE GEEQSWSAIM AGEEINEDYP VEIHEYLSAF 60
ENSIGAVDEM LKTMMSVSRN ELLQKLDPLE QAKVDLVSAY TLNSMFWVYL ATQGVNPKEH 120
PVKQELERIR VYMNRVKEIT DKKKAGKLDR GAASRFVKNA LWEPKSKNAS KVANKGKSKS 180 
Gene Ontology
  
Interpro
 IPR011082; Exosome-assoc_fac/DNA_repair.
 IPR007146; Sas10/Utp3/C1D. 
Pfam
 PF04000; Sas10_Utp3 
SMART
  
PROSITE
  
PRINTS