CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003628
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Vacuolar protein-sorting-associated protein 36 
Protein Synonyms/Alias
 ELL-associated protein of 45 kDa; ESCRT-II complex subunit VPS36 
Gene Name
 Vps36 
Gene Synonyms/Alias
 Eap45 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
107SSKNSYIKLSFKEHGubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113
Functional Description
 Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex. Its ability to bind ubiquitin probably plays a role in endosomal sorting of ubiquitinated cargo proteins by ESCRT complexes. The ESCRT-II complex may also play a role in transcription regulation, possibly via its interaction with ELL. Binds phosphoinosides such as PtdIns(3,4,5)P3 (By similarity). 
Sequence Annotation
 DOMAIN 1 88 GLUE N-terminal.
 DOMAIN 105 138 GLUE C-terminal.  
Keyword
 Coiled coil; Complete proteome; Cytoplasm; Direct protein sequencing; Endosome; Lipid-binding; Membrane; Nucleus; Protein transport; Reference proteome; Transcription; Transcription regulation; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 386 AA 
Protein Sequence
MDRFVWTSGL LEINETLVIQ QRGVRVYDGE EKIKFDAGTL LLSTHRLIWR DQKNNECCMA 60
IPLSQIVFIE EQAAGIGKSA KIVVHLHPAP PNKEPGPFQS SKNSYIKLSF KEHGQIEFYR 120
RLSEEMTQRR WETVPVSQSL QTKKGPQPGR IRAVGIVGIE RKLEEKRKET DKNISEAFED 180
LSKLMIQAKE MVELSKSIAN KIKEKQGDVT EDETIRFKSY LLSMGIANPV TRETYGSGTQ 240
YHMQLAKQLA GILQAPLEER GGIMSLTEVY CLVNRARGME LLSPEDLVNA CKMLEGLKLP 300
VRLRVFDSGV MVIELQTHKE EEMVASALET VSERGSLTSE EFAKLVGMSV LLAKERLLLA 360
EKMGHLCRDD SVEGLRFYPN LFMTQN 386 
Gene Ontology
 GO:0005768; C:endosome; ISS:UniProtKB.
 GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.
 GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0032266; F:phosphatidylinositol-3-phosphate binding; IEA:InterPro.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR007286; EAP30.
 IPR021648; VPS36_GLUE.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF04157; EAP30
 PF11605; Vps36_ESCRT-II 
SMART
  
PROSITE
 PS51495; GLUE 
PRINTS