CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026647
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Carbamoyl-phosphate synthase large chain 
Protein Synonyms/Alias
 Carbamoyl-phosphate synthetase ammonia chain 
Gene Name
 carB 
Gene Synonyms/Alias
 RPA4071 
Created Date
 July 27, 2013 
Organism
 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) 
NCBI Taxa ID
 258594 
Lysine Modification
Position
Peptide
Type
References
909ARIMAGEKIADLGLKacetylation[1]
Reference
 [1] System-wide studies of N-lysine acetylation in Rhodopseudomonas palustris reveal substrate specificity of protein acetyltransferases.
 Crosby HA, Pelletier DA, Hurst GB, Escalante-Semerena JC.
 J Biol Chem. 2012 May 4;287(19):15590-601. [PMID: 22416131
Functional Description
  
Sequence Annotation
 DOMAIN 138 333 ATP-grasp 1 (By similarity).
 DOMAIN 694 906 ATP-grasp 2 (By similarity).
 NP_BIND 164 221 ATP (By similarity).
 NP_BIND 720 798 ATP (By similarity).
 REGION 1 408 Carboxyphosphate synthetic domain (By
 REGION 409 565 Oligomerization domain (By similarity).
 REGION 566 971 Carbamoyl phosphate synthetic domain (By
 REGION 972 1109 Allosteric domain (By similarity).
 METAL 290 290 Magnesium or manganese 1 (By similarity).
 METAL 304 304 Magnesium or manganese 1 (By similarity).
 METAL 304 304 Magnesium or manganese 2 (By similarity).
 METAL 306 306 Magnesium or manganese 2 (By similarity).
 METAL 865 865 Magnesium or manganese 3 (By similarity).
 METAL 877 877 Magnesium or manganese 3 (By similarity).
 METAL 877 877 Magnesium or manganese 4 (By similarity).
 METAL 879 879 Magnesium or manganese 4 (By similarity).  
Keyword
 Amino-acid biosynthesis; Arginine biosynthesis; ATP-binding; Complete proteome; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Pyrimidine biosynthesis; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1109 AA 
Protein Sequence
MPKRTDISTI LIIGAGPIVI GQACEFDYSG TQAVKALKQE GYRVVLVNSN PATIMTDPEL 60
ADATYIEPIT PEIVAKIIEK ERYVIPGGFA LLPTMGGQTA LNCALSLRKL GTLEKFDVEM 120
IGATADAIDK AEDRERFREA MTKIGLETPN SRQVKSLPDA LRALDEIGFP ALIRPSFTMG 180
GTGGGIAYTK AEFIEIVERG IDASPTNEVL IEESILGWKE YEMEVVRDKH DNCIIVCSIE 240
NLDPMGVHTG DSITVAPALT LTDKEYQIMR DASLAVLREI GVETGGSNVQ FAVNPDDGRL 300
VVIEMNPRVS RSSALASKAT GFPIAKVAAK LAVGYSLDEI ANDITGGATP ASFEPTIDYV 360
VTKIPRFAFE KFPGASPTLT TAMKSVGEVM AIGRTFQESL QKALRGLESG LTGLDEIEID 420
GLGRGDDKNA IRAALGTPTP SRLLQVAQAM RLGWSNEEIF NSCKIDPWFL AQLRGIVDME 480
ARVREAGLPD HAFGMRTLKA MGFSDARLAV LADTTEAEVK AKRRALGVRP VFKRIDTCAA 540
EFASPTAYMY STYESPFAGP ASDESRPSDK QKVIILGGGP NRIGQGIEFD YCCCHACFAL 600
HDAGYESIMV NCNPETVSTD YDTADRLYFE PLTGEDVLEI IDTERSNGTL RGVIVQFGGQ 660
TPLKLARALE AADVPILGTS PDAIDLAEDR DRFKRILDKL RLKQPKNGIA YSVEQARLVA 720
AELGLPLVVR PSYVLGGRAM QIIREDNQLS DYLLGTLPEL VPGDVKARYP NDKTGQINTV 780
LGTNPLLFDR YLSDATEVDV DCLSDGKDTF IVGIMEHIEE AGIHSGDSAC SLPPHSLSAE 840
TIAELERQTR ELALGLDVVG LMNVQYAIKD GEIYVLEVNP RASRTVPFVA KVIGMPVAKL 900
AARIMAGEKI ADLGLKKRNL DHVGVKESVF PFARFPGVDT VLGPEMRSTG EVMGIDRSFE 960
IAFAKSQLGG GTRVPRKGTV FVSVRESDKA RIVDAVKLLH SVGFKVIATS GTQRYLSDHG 1020
VPAEKVNKVL EGRPHIVDAI MNGEVQLVFN TTEGPQALAD SRSLRRAALL HKVPYYTTLS 1080
GAVAAAKGIR AYLDGDLEVR TLQSYFSES 1109 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:HAMAP.
 GO:0000287; F:magnesium ion binding; IEA:HAMAP.
 GO:0030145; F:manganese ion binding; IEA:HAMAP.
 GO:0044205; P:'de novo' UMP biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0006526; P:arginine biosynthetic process; IEA:HAMAP. 
Interpro
 IPR011761; ATP-grasp.
 IPR013815; ATP_grasp_subdomain_1.
 IPR013816; ATP_grasp_subdomain_2.
 IPR006275; CarbamoylP_synth_lsu.
 IPR005481; CarbamoylP_synth_lsu_N.
 IPR005480; CarbamoylP_synth_lsu_oligo.
 IPR005479; CbamoylP_synth_lsu-like_ATP-bd.
 IPR005483; CbamoylP_synth_lsu_CPSase_dom.
 IPR011607; MGS-like_dom.
 IPR016185; PreATP-grasp_dom. 
Pfam
 PF00289; CPSase_L_chain
 PF02786; CPSase_L_D2
 PF02787; CPSase_L_D3
 PF02142; MGS 
SMART
 SM01096; CPSase_L_D3
 SM00851; MGS 
PROSITE
 PS50975; ATP_GRASP
 PS00867; CPSASE_2 
PRINTS
 PR00098; CPSASE.