CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038074
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Tetratricopeptide repeat protein 39C 
Protein Synonyms/Alias
  
Gene Name
 Ttc39c 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
30QLACDDLKTTEKLCEubiquitination[1]
34DDLKTTEKLCESEEAubiquitination[1]
48AGVIETIKNKIKKNVubiquitination[1]
106WILRKAWKIYSKCYVubiquitination[1]
203LTYASESKDMKAPLAubiquitination[1]
240KGGLDEAKAILLRKEubiquitination[1]
355LVLKEVQKLFKRKNNubiquitination[1]
360VQKLFKRKNNQIEQFubiquitination[1]
370QIEQFSVKKAERFRKubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 522 AA 
Protein Sequence
MSFGASFVSF LNAMMTFEEE KMQLACDDLK TTEKLCESEE AGVIETIKNK IKKNVDARKS 60
TPSMVDRLQR QIIIADCQVY LAVLSFVKQE LSAYIKGGWI LRKAWKIYSK CYVDINALQE 120
LYQKKLTEEP LASDAANDNH VVAEGVTEES LSRLKGAVSF GYGLFHLCIS MVPPNLLKII 180
NLLGFPGDRL QGLSSLTYAS ESKDMKAPLA TLALLWYHTV VRPFFALDGS DNKGGLDEAK 240
AILLRKESAY PNSSLFMFFK GRIQRLECQI NSALTSFHTA LELAVDQREI QHVCLYEIGW 300
CSMIELNFKD AFDSFERLKN ESRWSQCYYA YLTAVCQGAT GDVDGAQLVL KEVQKLFKRK 360
NNQIEQFSVK KAERFRKQTP TRALCVLASI EVLYLWKALP NCSFPNLQRM SQACHEVDDS 420
SVVGLKHLLL GAIHKCLGNS QDALQFFQRA ARDELCRQSN SYVPPYACYE LGCLLLDSAE 480
TVGRGRTLLL QAKEDFSGYD FENRLHVRIH AALASLRELV PQ 522 
Gene Ontology
  
Interpro
 IPR019412; OMP_IML2_mit/TPR_39.
 IPR011990; TPR-like_helical. 
Pfam
 PF10300; DUF3808 
SMART
  
PROSITE
  
PRINTS