CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002432
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H3 
Protein Synonyms/Alias
  
Gene Name
 hh3 
Gene Synonyms/Alias
 B7K22.030; NCU01635 
Created Date
 July 27, 2013 
Organism
 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DS 
NCBI Taxa ID
 367110 
Lysine Modification
Position
Peptide
Type
References
10RTKQTARKSTGGKAPacetylation[1]
15ARKSTGGKAPRKQLAacetylation[1, 2]
19TGGKAPRKQLASKAAacetylation[1]
24PRKQLASKAARKSAPacetylation[1]
28LASKAARKSAPSTGGacetylation[1]
57REIRRYQKSTELLIRacetylation[1]
Reference
 [1] Mapping of lysine methylation and acetylation in core histones of Neurospora crassa.
 Xiong L, Adhvaryu KK, Selker EU, Wang Y.
 Biochemistry. 2010 Jun 29;49(25):5236-43. [PMID: 20433192]
 [2] The Neurospora crassa White Collar-1 dependent blue light response requires acetylation of histone H3 lysine 14 by NGF-1.
 Grimaldi B, Coiro P, Filetici P, Berge E, Dobosy JR, Freitag M, Selker EU, Ballario P.
 Mol Biol Cell. 2006 Oct;17(10):4576-83. [PMID: 16914525
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 5 5 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 5 5 N6,N6-dimethyllysine; alternate (By
 MOD_RES 5 5 N6-methyllysine; alternate (By
 MOD_RES 10 10 N6,N6,N6-trimethyllysine; alternate.
 MOD_RES 10 10 N6-acetyllysine; alternate (By
 MOD_RES 11 11 Phosphoserine (By similarity).
 MOD_RES 15 15 N6,N6-dimethyllysine; alternate (By
 MOD_RES 15 15 N6-acetyllysine; alternate (By
 MOD_RES 15 15 N6-methyllysine; alternate (By
 MOD_RES 19 19 N6-acetyllysine; alternate (By
 MOD_RES 19 19 N6-methyllysine; alternate (By
 MOD_RES 24 24 N6-acetyllysine; alternate (By
 MOD_RES 24 24 N6-methyllysine; alternate (By
 MOD_RES 28 28 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 28 28 N6,N6-dimethyllysine; alternate (By
 MOD_RES 28 28 N6-acetyllysine; alternate (By
 MOD_RES 28 28 N6-methyllysine; alternate (By
 MOD_RES 37 37 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 37 37 N6,N6-dimethyllysine; alternate (By
 MOD_RES 37 37 N6-acetyllysine; alternate (By
 MOD_RES 37 37 N6-methyllysine; alternate (By
 MOD_RES 57 57 N6-acetyllysine (By similarity).
 MOD_RES 65 65 N6-acetyllysine (By similarity).
 MOD_RES 80 80 N6,N6,N6-trimethyllysine; alternate (By
 MOD_RES 80 80 N6,N6-dimethyllysine; alternate (By
 MOD_RES 80 80 N6-methyllysine; alternate (By  
Keyword
 Acetylation; Chromosome; Complete proteome; DNA damage; DNA repair; DNA-binding; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 136 AA 
Protein Sequence
MARTKQTARK STGGKAPRKQ LASKAARKSA PSTGGVKKPH RYKPGTVALR EIRRYQKSTE 60
LLIRKLPFQR LVREIAQDFK SDLRFQSSAI GALQESVESY LVSLFEDTNL CAIHAKRVTI 120
QSKDIQLARR LRGERN 136 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000164; Histone_H3. 
Pfam
 PF00125; Histone 
SMART
 SM00428; H3 
PROSITE
 PS00322; HISTONE_H3_1
 PS00959; HISTONE_H3_2 
PRINTS
 PR00622; HISTONEH3.