CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003031
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 30S ribosomal protein S19 
Protein Synonyms/Alias
  
Gene Name
 rpsS 
Gene Synonyms/Alias
 b3316; JW3278 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
17FIDLHLLKKVEKAVEacetylation[1]
18IDLHLLKKVEKAVESacetylation[1]
21HLLKKVEKAVESGDKacetylation[2]
28KAVESGDKKPLRTWSacetylation[1, 2]
29AVESGDKKPLRTWSRacetylation[1, 2]
70TDEMVGHKLGEFAPTacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 In the E.coli 70S ribosome in the initiation state (PubMed:12809609) it has been modeled to contact the 23S rRNA of the 50S subunit forming part of bridge B1a; this bridge is broken in the model with bound EF-G. The 23S rRNA contact site in bridge B1a is modeled to differ in different ribosomal states (PubMed:12859903), contacting alternately S13 or S19. In the 3.5 angstroms resolved ribosome structures (PubMed:16272117) the contacts between L5, S13 and S19 bridge B1b are different, confirming the dynamic nature of this interaction. Bridge B1a is not visible in the crystallized ribosomes due to 23S rRNA disorder. 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Direct protein sequencing; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding; tRNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 92 AA 
Protein Sequence
MPRSLKKGPF IDLHLLKKVE KAVESGDKKP LRTWSRRSTI FPNMIGLTIA VHNGRQHVPV 60
FVTDEMVGHK LGEFAPTRTY RGHAADKKAK KK 92 
Gene Ontology
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoliWiki.
 GO:0019843; F:rRNA binding; IEA:HAMAP.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
 GO:0006412; P:translation; IEA:HAMAP. 
Interpro
 IPR002222; Ribosomal_S19.
 IPR005732; Ribosomal_S19_bac-type.
 IPR020934; Ribosomal_S19_CS.
 IPR023575; Ribosomal_S19_SF. 
Pfam
 PF00203; Ribosomal_S19 
SMART
  
PROSITE
 PS00323; RIBOSOMAL_S19 
PRINTS
 PR00975; RIBOSOMALS19.