CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008245
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Inosine-5'-monophosphate dehydrogenase 4 
Protein Synonyms/Alias
 IMP dehydrogenase 4; IMPD 4; IMPDH 4 
Gene Name
 IMD4 
Gene Synonyms/Alias
 YML056C; YM9958.06C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
16KKALEHLKTYSSKDGacetylation[1]
144EVKVMKRKFGFSGFPacetylation[1]
161EDGKCPGKLVGLVTSacetylation[1]
194KNPVTGIKGITLKEGacetylation[1]
408SPGEYFYKDGKRLKAacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity). 
Sequence Annotation
 DOMAIN 122 183 CBS 1.
 DOMAIN 185 241 CBS 2.
 NP_BIND 279 281 NAD (By similarity).
 NP_BIND 329 331 NAD (By similarity).
 REGION 369 371 IMP binding (By similarity).
 REGION 392 393 IMP binding (By similarity).
 REGION 416 420 IMP binding (By similarity).
 ACT_SITE 336 336 Thioimidate intermediate (By similarity).
 METAL 331 331 Potassium; via carbonyl oxygen (By
 METAL 333 333 Potassium; via carbonyl oxygen (By
 METAL 336 336 Potassium; via carbonyl oxygen (By
 METAL 509 509 Potassium; via carbonyl oxygen; shared
 METAL 510 510 Potassium; via carbonyl oxygen; shared
 METAL 511 511 Potassium; via carbonyl oxygen; shared
 BINDING 334 334 IMP (By similarity).
 BINDING 450 450 IMP (By similarity).
 MOD_RES 125 125 Phosphoserine.  
Keyword
 CBS domain; Complete proteome; Cytoplasm; GMP biosynthesis; Metal-binding; NAD; Oxidoreductase; Phosphoprotein; Potassium; Purine biosynthesis; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 524 AA 
Protein Sequence
MSAAPLDYKK ALEHLKTYSS KDGLSVQELM DSTTRGGLTY NDFLVLPGLV NFPSSAVSLQ 60
TKLTKKITLN TPFVSSPMDT VTEADMAIYM ALLGGIGFIH HNCTPKEQAS MVKKVKMFEN 120
GFINSPIVIS PTTTVGEVKV MKRKFGFSGF PVTEDGKCPG KLVGLVTSRD IQFLEDDSLV 180
VSEVMTKNPV TGIKGITLKE GNEILKQTKK GKLLIVDDNG NLVSMLSRAD LMKNQNYPLA 240
SKSATTKQLL CGAAIGTIEA DKERLRLLVE AGLDVVILDS SQGNSVFQLN MIKWIKETFP 300
DLEIIAGNVA TREQAANLIA AGADGLRIGM GSGSICITQE VMACGRPQGT AVYNVCQFAN 360
QFGVPCMADG GVQNIGHITK ALALGSSTVM MGGMLAGTTE SPGEYFYKDG KRLKAYRGMG 420
SIDAMQKTGN KGNASTSRYF SESDSVLVAQ GVSGAVVDKG SIKKFIPYLY NGLQHSCQDI 480
GCESLTSLKE NVQNGEVRFE FRTASAQLEG GVHNLHSYEK RLYN 524 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0003938; F:IMP dehydrogenase activity; ISS:SGD.
 GO:0046872; F:metal ion binding; IEA:HAMAP.
 GO:0000166; F:nucleotide binding; IEA:HAMAP.
 GO:0006177; P:GMP biosynthetic process; IEA:HAMAP. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR000644; Cysta_beta_synth_core.
 IPR005990; IMP_DH.
 IPR015875; IMP_DH/GMP_Rdtase_CS.
 IPR001093; IMP_DH_GMPRt. 
Pfam
 PF00571; CBS
 PF00478; IMPDH 
SMART
 SM00116; CBS 
PROSITE
 PS51371; CBS
 PS00487; IMP_DH_GMP_RED 
PRINTS