CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009125
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 ubiquitin-protein ligase RNF216 
Protein Synonyms/Alias
 RING finger protein 216; Triad domain-containing protein 3; UbcM4-interacting protein 83; Ubiquitin-conjugating enzyme 7-interacting protein 1 
Gene Name
 Rnf216 
Gene Synonyms/Alias
 Triad3; Ubce7ip1; Uip83; Zin 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
407IDFFDYSKLTPLDQRubiquitination[1]
521QALLPAVKQEQEFYEubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Acts as an E3 ubiquitin ligase, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and then transfers it to substrates promoting their degradation by the proteasome. Promotes degradation of TRAF3, TLR4 and TLR9. Contributes to the regulation of antiviral responses. Down-regulates activation of NF-kappa-B, IRF3 activation and IFNB production. Promotes TNF and RIP mediated apoptosis (By similarity). 
Sequence Annotation
 ZN_FING 503 554 RING-type 1.
 ZN_FING 571 636 IBR-type.
 ZN_FING 663 702 RING-type 2.  
Keyword
 Alternative splicing; Apoptosis; Coiled coil; Complete proteome; Cytoplasm; Ligase; Metal-binding; Reference proteome; Repeat; Ubl conjugation; Ubl conjugation pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 853 AA 
Protein Sequence
MAEGNNKEEV IHLNNFPCHR GKEWMAVREG PITISDSSDE EGIPMLVTPA TEQQEDDLDD 60
DVILTETHKP QTSRPNLIKP AAQWQDLNRL GEERPRKSRA DFEADIHNYF SFCNNSLFGS 120
GAQDDSEDEY GGFLDLESGK KEGEAKPGPS SKQTADDIVN PRLEQKVIIL GENGLLFPES 180
EPLEVQNQSS EDSETELLSN PGEPAASVDD QLIGEEYWLD HPYFQAPNPQ PQERTNQVVP 240
QERHSESEMG PMFFRHDFPE PAFPRPEPQQ EGIPGPASPQ PAHPLGELED QQLAIDEDPG 300
PAFPLSGPQE ANLANMWEQE AAEVDQDLIP LLVKETEARF PDVASGYVEE IIHLKNYYDL 360
NVLCNFLLEN PDYPKREDRL IIHPSSSLLA SQDDAKLPKI DFFDYSKLTP LDQRCFIQAA 420
DLLMADFKML SSQDIKWALH ELKGHYAITR KAFSDAIKKW QELSPETSGK RKKRKEMNQY 480
SFIDFKFEQG NIKIEKRMFF LENKRRHCRY YDHQALLPAV KQEQEFYEQK IKEMAEHEDF 540
LLALQMNEEQ YQKDGQLIEC RCCYGEFPFE ELTQCADAHL FCKECLIRYA QEAVFGSGKS 600
ELSCMEGSCT CSFPTSELEK VLPQTILYKY YERKAEEEVA AAYADELVRC PSCSFPALLD 660
SDVKRFSCPN PRCRKETCRK CQGLWKEHNG LTCEELAEKD DIKYRTSIEE KMTAARIRKC 720
HKCGTGLIKS EGCNRMSCRC GAQMCYLCRV SINGYDHFCQ HPRSPGAPCQ ECSRCSLWTD 780
PTEDDEKLIE EIQKEAEEEQ KRKNGENTFK RIGPPLEKPA EKVQRVEALP RPVPQNLHPQ 840
MPPYAFVHPP FPLPPVRPVF NNFPINMGPV PAPYVPPLPN VRVNYDFGHM HVPLEHNLPM 900
HFGPQPRHRF 910 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
 GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
 GO:0050691; P:regulation of defense response to virus by host; ISS:UniProtKB.
 GO:0032648; P:regulation of interferon-beta production; ISS:UniProtKB. 
Interpro
 IPR002867; Znf_C6HC. 
Pfam
  
SMART
 SM00647; IBR 
PROSITE
 PS00518; ZF_RING_1
 PS50089; ZF_RING_2 
PRINTS