| Tag | Content |
|---|
| CPLM ID | CPLM-011748 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | Ribosome biogenesis protein YTM1 |
Protein Synonyms/Alias | Microtubule-associated protein YTM1 |
Gene Name | YTM1 |
Gene Synonyms/Alias | YOR272W |
Created Date | July 27, 2013 |
Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
NCBI Taxa ID | 559292 |
Lysine Modification | Position | Peptide | Type | References |
|---|
| 35 | MYAPISLKRYGLSEI | acetylation | [1] |
|
Reference | [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae. Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C. Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [ PMID: 22865919] |
Functional Description | Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. |
Sequence Annotation | REPEAT 101 140 WD 1.
REPEAT 142 180 WD 2.
REPEAT 206 244 WD 3.
REPEAT 285 325 WD 4.
REPEAT 327 366 WD 5.
REPEAT 373 413 WD 6.
REPEAT 424 460 WD 7.
REGION 99 460 Sufficient for interaction with ERB1 and |
Keyword | Complete proteome; Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing; WD repeat. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 460 AA |
Protein Sequence | MTEDKSQVKI RFFTREKDEL LHVQDTPMYA PISLKRYGLS EIVNHLLGSE KPVPFDFLIE 60
GELLRTSLHD YLTKKGLSSE ASLNVEYTRA ILPPSYLNSF SNEDWVSSLD VGDGSKHIIS 120
GSYDGIVRTW DLSGNVQKQY SGHSGPIRAV KYISNTRLVS AGNDRTLRLW KTKNDDLKLT 180
SQQQAQEDDD DEVNIEDGKT LAILEGHKAP VVSIDVSDNS RILSASYDNS IGFWSTIYKE 240
MTVVDPLEDI NNPNNKISTA ARKRRKLTMK DGTIRRRAPL SLLESHTAPV EQVIFDSTDN 300
TVGYSVSQDH TIKTWDLVTA RCIDTRTTSY SLLSIAQLST LNLLACGSSA RHITLHDPRV 360
GASSKVTQQQ LIGHKNFVSS LDTCPENEYI LCSGSHDGTV KVWDVRSTSP MYTITREDKS 420
VQKGVNDKVF AVKWAEKVGI ISAGQDKKIQ INKGDNIFKN 460 |
Gene Ontology | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. GO:0070545; C:PeBoW complex; IDA:SGD. GO:0030687; C:preribosome, large subunit precursor; IDA:SGD. GO:0051276; P:chromosome organization; IGI:SGD. GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD. GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. |
Interpro | |
Pfam | |
SMART | |
PROSITE | |
PRINTS | |