CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021306
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Phosducin-like protein 3 
Protein Synonyms/Alias
 HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1 
Gene Name
 PDCL3 
Gene Synonyms/Alias
 VIAF1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
83RRRLAEWKATKLKNKubiquitination[1]
90KATKLKNKFGEVLEIubiquitination[2, 3]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Modulates the activation of caspases during apoptosis. Is a substrate for Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) IAP-mediated ubiquitination. 
Sequence Annotation
 MOD_RES 234 234 Phosphoserine.
 MOD_RES 236 236 Phosphoserine.  
Keyword
 Apoptosis; Complete proteome; Cytoplasm; Host-virus interaction; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 239 AA 
Protein Sequence
MQDPNADTEW NDILRKKGIL PPKESLKELE EEAEEEQRIL QQSVVKTYED MTLEELEDHE 60
DEFNEEDERA IEMYRRRRLA EWKATKLKNK FGEVLEISGK DYVQEVTKAG EGLWVILHLY 120
KQGIPLCALI NQHLSGLARK FPDVKFIKAI STTCIPNYPD RNLPTIFVYL EGDIKAQFIG 180
PLVFGGMNLT RDELEWKLSE SGAIMTDLEE NPKKPIEDVL LSSVRRSVLM KRDSDSEGD 239 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0019048; P:virus-host interaction; IEA:UniProtKB-KW. 
Interpro
 IPR006442; Antitoxin_Phd/YefM.
 IPR024253; Phosducin_thioredoxin-like_dom.
 IPR012336; Thioredoxin-like_fold. 
Pfam
 PF02114; Phosducin 
SMART
  
PROSITE
  
PRINTS