Tag | Content |
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CPLM ID | CPLM-012977 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | RNA polymerase II-associated protein 1 |
Protein Synonyms/Alias | |
Gene Name | Rpap1 |
Gene Synonyms/Alias | |
Created Date | July 27, 2013 |
Organism | Rattus norvegicus (Rat) |
NCBI Taxa ID | 10116 |
Lysine Modification | Position | Peptide | Type | References |
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213 | RPNLITGKGLRSQAA | acetylation | [1] |
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Reference | [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV. Cell Rep. 2012 Aug 30;2(2):419-31. [ PMID: 22902405] |
Functional Description | Forms an interface between the RNA polymerase II enzyme and chaperone/scaffolding protein, suggesting that it is required to connect RNA polymerase II to regulators of protein complex formation. Required for interaction of the RNA polymerase II complex with acetylated histone H3 (By similarity). |
Sequence Annotation | MOD_RES 329 329 Phosphothreonine (By similarity). MOD_RES 1123 1123 Phosphothreonine (By similarity). |
Keyword | Complete proteome; DNA-binding; DNA-directed RNA polymerase; Nucleotidyltransferase; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transferase. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 1400 AA |
Protein Sequence | MMLSRPKPGE SEVDLLRFQS QFLEAGAAPA VQLVKGSRRR GDAHPDQLPP QDHRDVVMLD 60 SLPDLPPALL PAPSKRARPS PGRPLPHDED PEERLNRHDE HITAVLSKIV ERDTSSVTVT 120 LPVPSGVAFP PVFHRSQERQ VKPAASSKRS IFAQEIAARR VSDNRAPSAE QVVPSPDAPE 180 GAVPCETPSS KDRGSQLPGR SHSFHRPNLI TGKGLRSQAA VQEVQTIHEE NVARLQAMDP 240 EEILKEQQQL LAQLDPSLVA FLRAHNHTRE QTETKATKEQ NPERPSVPVS KEEPIMSTCT 300 GESGTRDKLE DKLEDKLQPR TPALKLPMTP NKEWLHMDTV ELEKLHWTQD LPPLRRQQTQ 360 ERMQARFSLQ GELLEPDVDL PTHLGLHHHG EEAERAGYSL QELFHLTRSQ VSQQRALALH 420 VLSHIVGRAQ AGEFGDRLVG SVLRLLLDAG FLFLLRFSLD DRIDSVIAAA VRALRALLVA 480 PGDEELLDST FSWYHGASVF PMMPSHDDKE DEDEDEELTK EKVNRKTPEE GSRPPPDLAR 540 HDVIKGLLAT NLLPRFRYVL EVTCPGPSVV LDILAVLIRL ARHSLESAMR VLECPRLMET 600 IVREFLPTSW SPIGVGPAPS LYKVPCAAAM KLLRVLASAG RNIAARLLSS FDVRSRLCRF 660 IAEAPRDLAL PFEEAEILTT EAFRLWAVAA SYGQGGDLYR ELYPVLMRAL QTLPPELSTH 720 PLQPLSMQRM ASLLTLLTQL TLAASTQPEA TSGSVESCVV AIPSSITWTH VSGLKPLVEP 780 CLKQTLKFLR RPDVWNALGP VPSACLLFLG AYYQTWSQQS GLCPEDWLQD MERFLDEFLL 840 PLLSQPPLGR MWDSLRDCSP LCNPLSCAST PEALPSLVSL GCAGGCPPLS VAGSASPFPF 900 LTALLSLINT LGQIHKGLCR QLAVVLTAPG LQNYFLQCVA PAPAPQLTPF SAWALRHEYH 960 LQYLVLSLAQ KAATSQPEPA ASTALHHVMA LVLLSRLLPG SEFLAHELLL SCVFRLGFLP 1020 ENASGGPEAA DFSDGLSLGN SGDPHCRRGA LLVQACQDLP SIRSCYLAHC SPARASLLTS 1080 QALYRGELPR VSSLLLPVPK EPLLPTDWPF QPLIHLYHRA SDTPSGLPAA DTVGITMRVL 1140 QWVLVLESWR PEALWAVPPA ARLARLMCVY LVDSELFRET PIQRLVAALL ARLCQPQVLP 1200 NLKLDCPLPG LTSFPDLYAS FLDHFEAVSF GDHLFGALVL LPLQRRFSVT LRLALFGEHV 1260 GVLRALGLPL AQLPVPLECY TEPAEDSLAL LQLYFRALVT GALHARWCPV LYTVAVAHVN 1320 SFVFCQDPKS SDEVKAARRS MLQKVWLLAD KDLRQHLLHY KLPNSSLPEG FELYPQLPRL 1380 RQQYLQTLPT EVLQNGGFKT 1400 |
Gene Ontology | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. GO:0003677; F:DNA binding; IEA:UniProtKB-KW. GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. GO:0032774; P:RNA biosynthetic process; IEA:GOC. |
Interpro | |
Pfam | |
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PROSITE | |
PRINTS | |