CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004144
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Neural cell adhesion molecule 1 
Protein Synonyms/Alias
 N-CAM-1; NCAM-1; CD56 
Gene Name
 Ncam1 
Gene Synonyms/Alias
 Ncam 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
1083EKGPVETKSEPPESEubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 This protein is a cell adhesion molecule involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc. 
Sequence Annotation
 DOMAIN 20 111 Ig-like C2-type 1.
 DOMAIN 116 205 Ig-like C2-type 2.
 DOMAIN 212 302 Ig-like C2-type 3.
 DOMAIN 309 402 Ig-like C2-type 4.
 DOMAIN 407 492 Ig-like C2-type 5.
 DOMAIN 497 596 Fibronectin type-III 1.
 DOMAIN 598 692 Fibronectin type-III 2.
 REGION 152 156 Heparin-binding (Potential).
 REGION 161 165 Heparin-binding (Potential).
 MOD_RES 774 774 Phosphoserine.
 MOD_RES 887 887 Phosphoserine.
 MOD_RES 946 946 Phosphoserine.
 MOD_RES 950 950 Phosphothreonine.
 MOD_RES 952 952 Phosphothreonine.
 MOD_RES 958 958 Phosphoserine.
 MOD_RES 1005 1005 Phosphoserine.
 CARBOHYD 222 222 N-linked (GlcNAc...); partial.
 CARBOHYD 316 316 N-linked (GlcNAc...).
 CARBOHYD 348 348 N-linked (GlcNAc...).
 CARBOHYD 424 424 N-linked (GlcNAc...).
 CARBOHYD 450 450 N-linked (GlcNAc...).
 CARBOHYD 453 453 N-linked (GlcNAc...); atypical.
 CARBOHYD 479 479 N-linked (GlcNAc...).
 DISULFID 41 96
 DISULFID 139 189
 DISULFID 235 288 Probable.
 DISULFID 330 386 Probable.
 DISULFID 427 480 Probable.  
Keyword
 3D-structure; Alternative splicing; Cell adhesion; Cell membrane; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; GPI-anchor; Heparin-binding; Immunoglobulin domain; Lipoprotein; Membrane; Phosphoprotein; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1115 AA 
Protein Sequence
MLRTKDLIWT LFFLGTAVSL QVDIVPSQGE ISVGESKFFL CQVAGDAKDK DISWFSPNGE 60
KLSPNQQRIS VVWNDDDSST LTIYNANIDD AGIYKCVVTA EDGTQSEATV NVKIFQKLMF 120
KNAPTPQEFK EGEDAVIVCD VVSSLPPTII WKHKGRDVIL KKDVRFIVLS NNYLQIRGIK 180
KTDEGTYRCE GRILARGEIN FKDIQVIVNV PPTVQARQSI VNATANLGQS VTLVCDADGF 240
PEPTMSWTKD GEPIENEEED DEKHIFSDDS SELTIRNVDK NDEAEYVCIA ENKAGEQDAS 300
IHLKVFAKPK ITYVENQTAM ELEEQVTLTC EASGDPIPSI TWRTSTRNIS SEEKTLDGHM 360
VVRSHARVSS LTLKSIQYTD AGEYICTASN TIGQDSQSMY LEFQYAPKLQ GPVAVYTWEG 420
NQVNITCEVF AYPSATISWF RDGQLLPSSN YSNIKIYNTP SASYLEVTPD SENDFGNYNC 480
TAVNRIGQES LEFILVQADT PSSPSIDRVE PYSSTAQVQF DEPEATGGVP ILKYKAEWKS 540
LGEESWHFKW YDAKEANMEG IVTIMGLKPE TRYSVRLAAL NGKGLGEISA ATEFKTQPVR 600
EPSAPKLEGQ MGEDGNSIKV NLIKQDDGGS PIRHYLVKYR ALASEWKPEI RLPSGSDHVM 660
LKSLDWNAEY EVYVVAENQQ GKSKAAHFVF RTSAQPTAIP ANGSPTAGLS TGAIVGILIV 720
IFVLLLVVMD ITCYFLNKCG LLMCIAVNLC GKAGPGAKGK DMEEGKAAFS KDESKEPIVE 780
VRTEEERTPN HDGGKHTEPN ETTPLTEPEL PADTTATVED MLPSVTTVTT NSDTITETFA 840
TAQNSPTSET TTLTSSIAPP ATTVPDSNSV PAGQATPSKG VTASSSSPAS APKVAPLVDL 900
SDTPTSAPSA SNLSSTVLAN QGAVLSPSTP ASAGETSKAP PASKASPAPT PTPAGAASPL 960
AAVAAPATDA PQAKQEAPST KGPDPEPTQP GTVKNPPEAA TAPASPKSKA ATTNPSQGED 1020
LKMDEGNFKT PDIDLAKDVF AALGSPRPAT GASGQASELA PSPADSAVPP APAKTEKGPV 1080
ETKSEPPESE AKPAPTEVKT VPNDATQTKE NESKA 1115 
Gene Ontology
 GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.
 GO:0030424; C:axon; IDA:MGI.
 GO:0009897; C:external side of plasma membrane; IDA:MGI.
 GO:0030426; C:growth cone; IDA:MGI.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0043025; C:neuronal cell body; IDA:MGI.
 GO:0008201; F:heparin binding; IEA:UniProtKB-KW.
 GO:0007166; P:cell surface receptor signaling pathway; IDA:MGI.
 GO:0034109; P:homotypic cell-cell adhesion; IMP:MGI.
 GO:0031175; P:neuron projection development; IGI:MGI.
 GO:0050850; P:positive regulation of calcium-mediated signaling; IDA:MGI.
 GO:0001928; P:regulation of exocyst assembly; IMP:MGI. 
Interpro
 IPR003961; Fibronectin_type3.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR013098; Ig_I-set.
 IPR003598; Ig_sub2.
 IPR009138; Neural_cell_adh. 
Pfam
 PF00041; fn3
 PF07679; I-set 
SMART
 SM00060; FN3
 SM00408; IGc2 
PROSITE
 PS50853; FN3
 PS50835; IG_LIKE 
PRINTS
 PR01838; NCAMFAMILY.