CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019891
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NAD-dependent malic enzyme, mitochondrial 
Protein Synonyms/Alias
 NAD-ME; Malic enzyme 2 
Gene Name
 Me2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
26VHLKEKGKPLMLNPRacetylation[1]
26VHLKEKGKPLMLNPRsuccinylation[1]
74RFHRNLKKMTSPLEKacetylation[1]
74RFHRNLKKMTSPLEKsuccinylation[1]
131GHIFRRPKGLFISISacetylation[1]
156NWPENHVKAVVVTDGacetylation[1, 2]
224FYMGLYQKRDRSQLYacetylation[1]
224FYMGLYQKRDRSQLYsuccinylation[1]
240DLMDEFMKAITDRYGacetylation[1]
240DLMDEFMKAITDRYGsuccinylation[1]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [2] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
  
Sequence Annotation
 NP_BIND 311 328 NAD (By similarity).
 ACT_SITE 112 112 Proton donor (By similarity).
 ACT_SITE 183 183 Proton acceptor (By similarity).
 METAL 255 255 Divalent metal cation (By similarity).
 METAL 256 256 Divalent metal cation (By similarity).
 METAL 279 279 Divalent metal cation (By similarity).
 BINDING 165 165 NAD (By similarity).
 BINDING 279 279 NAD (By similarity).
 BINDING 421 421 NAD (By similarity).
 MOD_RES 156 156 N6-acetyllysine (By similarity).
 MOD_RES 224 224 N6-acetyllysine (By similarity).
 MOD_RES 240 240 N6-acetyllysine (By similarity).
 MOD_RES 272 272 N6-acetyllysine (By similarity).
 MOD_RES 346 346 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Allosteric enzyme; Complete proteome; Metal-binding; Mitochondrion; NAD; Oxidoreductase; Reference proteome; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 589 AA 
Protein Sequence
MFSRLRAVTT PCTLTCRRVH LKEKGKPLML NPRTNKGMAF TLQERQMLGL QGLLPPKIET 60
QDIQALRFHR NLKKMTSPLE KYIYIMGIQE RNEKLFYRIL QDDIESLMPI VYTPTVGLAC 120
CQYGHIFRRP KGLFISISDR GHVRSIVDNW PENHVKAVVV TDGERILGLG DLGVYGMGIP 180
VGKLCLYTAC AGIQPEKCLP VCIDVGTDNM ALLKDPFYMG LYQKRDRSQL YDDLMDEFMK 240
AITDRYGRNT LIQFEDFGNH NAFRFLRKYQ QKYCTFNDDI QGTAAVALSG LLAAQRVINK 300
PVSEHKILFL GAGEAALGIA NLIVLSMVES GLSEEEAQRK IWMFDKSGLL VKGRTASIDS 360
NQEPYAHAAP ESIPATFEDA VNKLKPSVII GVAGAGPLFT HGVIKAMASI NERPIIFALS 420
NPTAQAECTA EDAYTLTEGR CLFASGSPFE PVKLQDGRVF TPGQGNNAYI FPGVALAVIL 480
CEARHISDTV FLEAAKALTT QLTDAELAQG RLYPSLANIQ EVSANIAIKL AEYLYANKMA 540
FRYPEPEDKA RYVRERIWRS NYVSLLPDVY DWPESSLTPP QITEEKLPH 589 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IDA:MGI.
 GO:0016619; F:malate dehydrogenase (oxaloacetate-decarboxylating) activity; IEA:EC.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0051287; F:NAD binding; IEA:InterPro.
 GO:0006108; P:malate metabolic process; IEA:InterPro. 
Interpro
 IPR015884; Malic_enzyme_CS.
 IPR012301; Malic_N.
 IPR012302; Malic_NAD-bd.
 IPR001891; Malic_OxRdtase.
 IPR016040; NAD(P)-bd_dom. 
Pfam
 PF00390; malic
 PF03949; Malic_M 
SMART
 SM00919; Malic_M 
PROSITE
 PS00331; MALIC_ENZYMES 
PRINTS
 PR00072; MALOXRDTASE.