CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009216
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Gamma-aminobutyric acid receptor-associated protein-like 2 
Protein Synonyms/Alias
 GABA(A) receptor-associated protein-like 2; Ganglioside expression factor 2; GEF-2; General protein transport factor p16; Golgi-associated ATPase enhancer of 16 kDa; GATE-16; MAP1 light chain 3-related protein 
Gene Name
 GABARAPL2 
Gene Synonyms/Alias
 FLC3A; GEF2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
24ESAKIRAKYPDRVPVacetylation[1]
24ESAKIRAKYPDRVPVubiquitination[2]
Reference
 [1] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
 Ubiquitin-like modifier involved in intra-Golgi traffic. Modulates intra-Golgi transport through coupling between NSF activity and SNAREs activation. It first stimulates the ATPase activity of NSF which in turn stimulates the association with GOSR1 (By similarity). Involved in autophagy. Plays a role in mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirements and preventing excess ROS production. Whereas LC3s are involved in elongation of the phagophore membrane, the GABARAP/GATE-16 subfamily is essential for a later stage in autophagosome maturation. 
Sequence Annotation
 REGION 1 22 Interaction with beta-tubulin (By
 REGION 36 68 Interaction with GABRG2 (Potential).
 MOD_RES 24 24 N6-acetyllysine.
 MOD_RES 39 39 Phosphoserine.
 LIPID 116 116 Phosphatidylethanolamine amidated  
Keyword
 Acetylation; Autophagy; Complete proteome; Cytoplasmic vesicle; Golgi apparatus; Lipoprotein; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 117 AA 
Protein Sequence
MKWMFKEDHS LEHRCVESAK IRAKYPDRVP VIVEKVSGSQ IVDIDKRKYL VPSDITVAQF 60
MWIIRKRIQL PSEKAIFLFV DKTVPQSSLT MGQLYEKEKD EDGFLYVAYS GENTFGF 117 
Gene Ontology
 GO:0000421; C:autophagic vacuole membrane; IDA:UniProtKB.
 GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0000139; C:Golgi membrane; ISS:UniProtKB.
 GO:0051117; F:ATPase binding; ISS:UniProtKB.
 GO:0048487; F:beta-tubulin binding; ISS:UniProtKB.
 GO:0050811; F:GABA receptor binding; ISS:UniProtKB.
 GO:0008017; F:microtubule binding; NAS:UniProtKB.
 GO:0000149; F:SNARE binding; ISS:UniProtKB.
 GO:0006914; P:autophagy; NAS:UniProtKB.
 GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:UniProtKB.
 GO:1901799; P:negative regulation of proteasomal protein catabolic process; IMP:BHF-UCL.
 GO:0032781; P:positive regulation of ATPase activity; ISS:UniProtKB.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR004241; Atg8_ubiquitin-like. 
Pfam
 PF02991; Atg8 
SMART
  
PROSITE
  
PRINTS