CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-036872
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger MYND domain-containing protein 11 
Protein Synonyms/Alias
  
Gene Name
 ZMYND11 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
29IEIIRNQKQIANIDRubiquitination[1]
125CFRVYHSKCLSDEFRubiquitination[1, 2]
266GFGFWPAKVMQKEDNubiquitination[1]
270WPAKVMQKEDNQVDVubiquitination[1]
314KRSMGWKKACDELELubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 571 AA 
Protein Sequence
MARLTKRRQA DTKAIQHLWA AIEIIRNQKQ IANIDRITKY MSRVHGMHPK ETTRQLSLAV 60
KDGLIVETLT VGCKGSKAGI EQEGYWLPGD EIDWETENHD WYCFECHLPG EVLICDLCFR 120
VYHSKCLSDE FRLRDSSSPW QCPVCRSIKK KNTNKQEMGT YLRFIVSRMK ERKVNEGKYR 180
SYEEFKADAQ LLLHNTVIFY GADSEQADIA RMLYKDTCHE LDELQLCKNC FYLSNARPDN 240
WFCYPCIPNH ELVWAKMKGF GFWPAKVMQK EDNQVDVRFF GHHHQRAWIP SENIQDITVN 300
IHRLHVKRSM GWKKACDELE LHQRFLREGR FWKSKNEDRG EEEAESSISS TSNEQLKVTQ 360
EPRAKKGRRN QSVEPKKEEP EPETEAVSSS QEIPTMPQPI EKVSVSTQTK KLSASSPRML 420
HRSTQTTNDG VCQSMCHDKY TKIFNDFKDR MKSDHKRETE RVVREALEKL RSEMEEEKRQ 480
AVNKAVANMQ GEMDRKCKQV KEKCKEEFVE EIKKLATQHK QLISQTKKKQ WCYNCEEEAM 540
YHCCWNTSYC SIKCQQEHWH AEHKRTCRRK R 571 
Gene Ontology
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001487; Bromodomain.
 IPR000313; PWWP.
 IPR019786; Zinc_finger_PHD-type_CS.
 IPR011011; Znf_FYVE_PHD.
 IPR002893; Znf_MYND.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF00439; Bromodomain
 PF00855; PWWP 
SMART
 SM00297; BROMO
 SM00249; PHD
 SM00293; PWWP
 SM00184; RING 
PROSITE
 PS50014; BROMODOMAIN_2
 PS50812; PWWP
 PS01360; ZF_MYND_1
 PS50865; ZF_MYND_2
 PS01359; ZF_PHD_1
 PS50016; ZF_PHD_2 
PRINTS