CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024151
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 LETM1 and EF-hand domain-containing protein 1, mitochondrial 
Protein Synonyms/Alias
 Leucine zipper-EF-hand-containing transmembrane protein 1 
Gene Name
 Letm1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
283AAKGNATKDFSAFFQacetylation[1]
291DFSAFFQKIRETGERacetylation[1]
291DFSAFFQKIRETGERubiquitination[2]
458VAEVEGEKVDNKAKLacetylation[1, 3]
586SEDLQEIKKELSKTGacetylation[1, 4]
596LSKTGEEKYIEESAAacetylation[1, 3, 5, 6]
605IEESAASKRLSKRVQacetylation[3]
660ISAMKQIKHIPEHKLacetylation[1]
722KEEKIEEKEKAKEKAacetylation[1]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [4] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [5] The fasted/fed mouse metabolic acetylome: N6-acetylation differences suggest acetylation coordinates organ-specific fuel switching.
 Yang L, Vaitheesvaran B, Hartil K, Robinson AJ, Hoopmann MR, Eng JK, Kurland IJ, Bruce JE.
 J Proteome Res. 2011 Sep 2;10(9):4134-49. [PMID: 21728379]
 [6] Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice.
 Fritz KS, Galligan JJ, Hirschey MD, Verdin E, Petersen DR.
 J Proteome Res. 2012 Mar 2;11(3):1633-43. [PMID: 22309199
Functional Description
 Crucial for the maintenance of mitochondrial tubular networks and for the assembly of the supercomplexes of the respiratory chain. Required for the maintenance of the tubular shape and cristae organization (By similarity). 
Sequence Annotation
 DOMAIN 149 417 LETM1.
 DOMAIN 662 697 EF-hand.
 MOD_RES 596 596 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Calcium; Coiled coil; Complete proteome; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Transit peptide; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 738 AA 
Protein Sequence
MASILLRSCR GRGPARLAPP RAASPRGSLR DRACLSCTRT LGLTSRESVL SRCCTPAHPV 60
YLCFKGEPLS CWTQRPECQG TAARTTWTPA SARLVVTGPQ YLPVRGWHSS SPLGEDSVIE 120
KSLKSLKDKN KKLEEGGPVY SPPAQVVVRK SLGQKVLDEL RHYYHGFRLL WIDTKIAARM 180
LWRILNGHTL TRRERRQFLR ICADLFRLVP FLVFVVVPFM EFLLPVVVKL FPNMLPSTFE 240
TQSIKEERLK KELRVKLELA KFLQDTIEEM ALKNKAAKGN ATKDFSAFFQ KIRETGERPS 300
NEEIMRFSKL FEDELTLDNL TRPQLVALCK LLELQSIGTN NFLRFQLTMR LRSIKADDKL 360
ISEEGVDSLT VKELQAACRA RGMRALGVTE DRLKGQLKQW LDLHLHHEIP TSLLILSRAM 420
YLPDTLSPAD QLKSTLQTLP EIVAKEAQVK VAEVEGEKVD NKAKLEATLQ EEAAIQQEHL 480
EELKRASEAV KDIQPEVAEA TLPGRPGPEP QPPVDDVILP SEVLTDTAPV LEGLKGEEIT 540
KEEIDILSDA CSKLQEQKKS LTKEKEELEL LKEDVQDYSE DLQEIKKELS KTGEEKYIEE 600
SAASKRLSKR VQQMIGQIDG LITQLETTQQ DGKLGPSQST PTGESVISIT ELISAMKQIK 660
HIPEHKLISL TSALDDNKDG NINIDDLVKV IDLVNKEDVQ ISTTQVAEIV ATLEKEEKIE 720
EKEKAKEKAE KEAAEVKN 738 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0042407; P:cristae formation; IEA:Compara. 
Interpro
 IPR018247; EF_Hand_1_Ca_BS.
 IPR011685; LETM1. 
Pfam
 PF07766; LETM1 
SMART
  
PROSITE
 PS00018; EF_HAND_1
 PS50222; EF_HAND_2 
PRINTS