CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013968
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Decaprenyl-diphosphate synthase subunit 1 
Protein Synonyms/Alias
 All-trans-decaprenyl-diphosphate synthase subunit 1; Decaprenyl pyrophosphate synthase subunit 1; Trans-prenyltransferase 1; TPT 1 
Gene Name
 PDSS1 
Gene Synonyms/Alias
 DPS1; TPRT 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
97EKYTDPFKLGWRDLKubiquitination[1, 2]
104KLGWRDLKGLYEDIRacetylation[3]
104KLGWRDLKGLYEDIRubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [3] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786
Functional Description
 Supplies decaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinones ubiquinone-10. 
Sequence Annotation
 METAL 180 180 Magnesium 1 (By similarity).
 METAL 180 180 Magnesium 2 (By similarity).
 METAL 184 184 Magnesium 1 (By similarity).
 METAL 184 184 Magnesium 2 (By similarity).
 METAL 307 307 Magnesium 3 (By similarity).
 BINDING 134 134 Isopentenyl diphosphate (By similarity).
 BINDING 137 137 Isopentenyl diphosphate (By similarity).
 BINDING 173 173 Isopentenyl diphosphate (By similarity).
 BINDING 189 189 Polyprenyl diphosphate (By similarity).
 BINDING 190 190 Isopentenyl diphosphate (By similarity).
 BINDING 266 266 Polyprenyl diphosphate (By similarity).
 BINDING 267 267 Polyprenyl diphosphate (By similarity).
 BINDING 304 304 Polyprenyl diphosphate (By similarity).
 BINDING 321 321 Polyprenyl diphosphate (By similarity).
 MOD_RES 57 57 Phosphotyrosine (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Disease mutation; Isoprene biosynthesis; Magnesium; Metal-binding; Mitochondrion; Phosphoprotein; Reference proteome; Transferase; Ubiquinone biosynthesis. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 415 AA 
Protein Sequence
MASRWWRWRR GCSWKPAARS PGPGSPGRAG PLGPSAAAEV RAQVHRRKGL DLSQIPYINL 60
VKHLTSACPN VCRISRFHHT TPDSKTHSGE KYTDPFKLGW RDLKGLYEDI RKELLISTSE 120
LKEMSEYYFD GKGKAFRPII VALMARACNI HHNNSRHVQA SQRAIALIAE MIHTASLVHD 180
DVIDDASSRR GKHTVNKIWG EKKAVLAGDL ILSAASIALA RIGNTTVISI LTQVIEDLVR 240
GEFLQLGSKE NENERFAHYL EKTFKKTASL IANSCKAVSV LGCPDPVVHE IAYQYGKNVG 300
IAFQLIDDVL DFTSCSDQMG KPTSADLKLG LATGPVLFAC QQFPEMNAMI MRRFSLPGDV 360
DRARQYVLQS DGVQQTTYLA QQYCHEAIRE ISKLRPSPER DALIQLSEIV LTRDK 415 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0046982; F:protein heterodimerization activity; IDA:HGNC.
 GO:0000010; F:trans-hexaprenyltranstransferase activity; IEA:Compara.
 GO:0050347; F:trans-octaprenyltranstransferase activity; IEA:Compara.
 GO:0008299; P:isoprenoid biosynthetic process; IDA:HGNC.
 GO:0051290; P:protein heterotetramerization; IEA:Compara.
 GO:0006744; P:ubiquinone biosynthetic process; IDA:HGNC. 
Interpro
 IPR000092; Polyprenyl_synt.
 IPR017446; Polyprenyl_synth-rel.
 IPR008949; Terpenoid_synth. 
Pfam
 PF00348; polyprenyl_synt 
SMART
  
PROSITE
 PS00723; POLYPRENYL_SYNTHASE_1
 PS00444; POLYPRENYL_SYNTHASE_2 
PRINTS