CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026033
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Carbamoyl-phosphate synthase large chain 
Protein Synonyms/Alias
 Carbamoyl-phosphate synthetase ammonia chain 
Gene Name
 carB 
Gene Synonyms/Alias
 GK0795 
Created Date
 July 27, 2013 
Organism
 Geobacillus kaustophilus (strain HTA426) 
NCBI Taxa ID
 235909 
Lysine Modification
Position
Peptide
Type
References
984LAVIDLGKEEGEANKacetylation[1]
Reference
 [1] Proteomic analysis of acetylation in thermophilic Geobacillus kaustophilus.
 Lee DW, Kim D, Lee YJ, Kim JA, Choi JY, Kang S, Pan JG.
 Proteomics. 2013 Aug;13(15):2278-82. [PMID: 23696451
Functional Description
  
Sequence Annotation
 DOMAIN 133 327 ATP-grasp 1 (By similarity).
 DOMAIN 675 862 ATP-grasp 2 (By similarity).
 NP_BIND 159 216 ATP (By similarity).
 NP_BIND 701 755 ATP (By similarity).
 REGION 1 401 Carboxyphosphate synthetic domain (By
 REGION 402 548 Oligomerization domain (By similarity).
 REGION 549 931 Carbamoyl phosphate synthetic domain (By
 REGION 932 1042 Allosteric domain (By similarity).
 METAL 284 284 Magnesium or manganese 1 (By similarity).
 METAL 298 298 Magnesium or manganese 1 (By similarity).
 METAL 298 298 Magnesium or manganese 2 (By similarity).
 METAL 300 300 Magnesium or manganese 2 (By similarity).
 METAL 821 821 Magnesium or manganese 3 (By similarity).
 METAL 833 833 Magnesium or manganese 3 (By similarity).
 METAL 833 833 Magnesium or manganese 4 (By similarity).
 METAL 835 835 Magnesium or manganese 4 (By similarity).  
Keyword
 Amino-acid biosynthesis; Arginine biosynthesis; ATP-binding; Complete proteome; Ligase; Magnesium; Manganese; Metal-binding; Nucleotide-binding; Pyrimidine biosynthesis; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1042 AA 
Protein Sequence
MPKDSSLQSI LLIGSGPIVI GQAAEFDYSG TQACIALKEE GYRVILVNNN PATIMTDDVH 60
ADAVYFEPLT VEAVEAIIAK ERPDGLLATF GGQTGLNLAF QLHEAGVLEK YGVRLLGTPI 120
EAIKRGEDRE AFRALMHELG EPVPESEIVT SVEEAVAFAE QIGFPIIIRP AYTLGGTGGG 180
IAENMEQFLA LVEKGLNESP IHQCLIERSV AGFKEIEYEV MRDQSNTCIT VCNMENVDPV 240
GIHTGDSIVV APSQTLTDEE YQMLRSSAVK IISALGIIGG CNIQFALDPN SKQYYLIEVN 300
PRVSRSSALA SKATGYPIAR IAAKLAVGYT LAELVNPVTK TTYASFEPAL DYVVVKFPRL 360
PFDKFPHADR KLGTQMKATG EVMAIDRNME RAFQKAVQSL EGKNNGLLLP ELSAKTDDEL 420
KQLLVDKDDR RFFAMLELLR RGVSVEAIHK WTKIDRFFLC SFERLVALEK QAAAATLDTI 480
EEQTFRFLKE KGCSDAFLAE TWGVTELDVR NKRKELGIVP SYKMVDTCAA EFHSETDYYY 540
STYFGEDERK QPSGKEKVLI IGAGPIRIGQ GIEFDYSSVH SVFALQKEGY ETVMINNNPE 600
TVSTDFAVAD RLYFEPLTLE SVLDVIEAEQ IKHVIVQFGG QTAINLVKGL EEAGVPLLGV 660
TYDMIDQLED RDRFYQLLEE LDIPHVPGLV ANNAEELAAK AAEIGCPVLL RPSYVIGGRG 720
MFIVHSEAQL AALIEQGELT YPILIDAYLD GKEAEADIVT DGTDIVLPVI IEHVEKAGIH 780
SGDSYAWLPA QTLTGEEKAK IIDYAGRIAK KLGFKGIMNI QYVIADGNVY VLEVNPRASR 840
TVPIVSKTTG VPLAQIATKL LLGKSLVDIV DEKARGLAVM PYAVLKYPVF STHKLPGVDP 900
VVGPEMKSTG EGISIAATKE EAAYKAFYPY LQKKANANEV YVIGNIDAEL EAEMTAKQLT 960
IVADVPFADW VKRDTALAVI DLGKEEGEAN KRMTALSRQL LVFTERETLK LFLQALDVDH 1020
LDVQPIHGWL EKKKQAEQAV IA 1042 
Gene Ontology
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:HAMAP.
 GO:0000287; F:magnesium ion binding; IEA:HAMAP.
 GO:0030145; F:manganese ion binding; IEA:HAMAP.
 GO:0044205; P:'de novo' UMP biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0006526; P:arginine biosynthetic process; IEA:HAMAP. 
Interpro
 IPR011761; ATP-grasp.
 IPR013815; ATP_grasp_subdomain_1.
 IPR013816; ATP_grasp_subdomain_2.
 IPR006275; CarbamoylP_synth_lsu.
 IPR005481; CarbamoylP_synth_lsu_N.
 IPR005480; CarbamoylP_synth_lsu_oligo.
 IPR005479; CbamoylP_synth_lsu-like_ATP-bd.
 IPR005483; CbamoylP_synth_lsu_CPSase_dom.
 IPR016185; PreATP-grasp_dom. 
Pfam
 PF00289; CPSase_L_chain
 PF02786; CPSase_L_D2
 PF02787; CPSase_L_D3 
SMART
 SM01096; CPSase_L_D3 
PROSITE
 PS50975; ATP_GRASP
 PS00866; CPSASE_1
 PS00867; CPSASE_2 
PRINTS
 PR00098; CPSASE.