CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023790
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transmembrane emp24 domain-containing protein 3 
Protein Synonyms/Alias
 Membrane protein p24B; p24 family protein gamma-4; p24gamma4; p26 
Gene Name
 TMED3 
Gene Synonyms/Alias
 C15orf22; UNQ5357/PRO1078 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
83TIYRETKKQYDSFTYubiquitination[1]
152VTIHEALKTVIDSQTubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Contributes to the coupled localization of TMED2 and TMED10 in the cis-Golgi network. 
Sequence Annotation
 DOMAIN 38 120 GOLD.
 MOTIF 204 217 COPI vesicle coat-binding (Potential).
 MOTIF 204 205 COPII vesicle coat-binding (Potential).  
Keyword
 Alternative splicing; Complete proteome; Cytoplasmic vesicle; Endoplasmic reticulum; Golgi apparatus; Membrane; Polymorphism; Protein transport; Reference proteome; Signal; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 217 AA 
Protein Sequence
MGSTVPRSAS VLLLLLLLRR AEQPCGAELT FELPDNAKQC FHEEVEQGVK FSLDYQVITG 60
GHYDVDCYVE DPQGNTIYRE TKKQYDSFTY RAEVKGVYQF CFSNEFSTFS HKTVYFDFQV 120
GDEPPILPDM GNRVTALTQM ESACVTIHEA LKTVIDSQTH YRLREAQDRA RAEDLNSRVS 180
YWSVGETIAL FVVSFSQVLL LKSFFTEKRP ISRAVHS 217 
Gene Ontology
 GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.
 GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IDA:UniProtKB.
 GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.
 GO:0032580; C:Golgi cisterna membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR009038; GOLD.
 IPR015718; P24-related. 
Pfam
 PF01105; EMP24_GP25L 
SMART
  
PROSITE
 PS50866; GOLD 
PRINTS