CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013737
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyridoxal biosynthesis lyase PdxS 
Protein Synonyms/Alias
  
Gene Name
 pdxS 
Gene Synonyms/Alias
 GK0011 
Created Date
 July 27, 2013 
Organism
 Geobacillus kaustophilus (strain HTA426) 
NCBI Taxa ID
 235909 
Lysine Modification
Position
Peptide
Type
References
173KVNAQIRKVVNMSEDacetylation[1]
Reference
 [1] Proteomic analysis of acetylation in thermophilic Geobacillus kaustophilus.
 Lee DW, Kim D, Lee YJ, Kim JA, Choi JY, Kang S, Pan JG.
 Proteomics. 2013 Aug;13(15):2278-82. [PMID: 23696451
Functional Description
 Involved in the production of pyridoxal phosphate, probably by incorporating ammonia into the pyridine ring (By similarity). 
Sequence Annotation
  
Keyword
 3D-structure; Complete proteome; Lyase; Pyridoxal phosphate. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 294 AA 
Protein Sequence
MALTGTDRVK RGMAEMQKGG VIMDVVNAEQ AKIAEAAGAV AVMALERVPA DIRAAGGVAR 60
MADPTVIEEV MNAVSIPVMA KVRIGHYVEA RVLEALGVDY IDESEVLTPA DEEFHIDKRQ 120
FTVPFVCGCR DLGEAARRIA EGASMLRTKG EPGTGNIVEA VRHMRKVNAQ IRKVVNMSED 180
ELVAEAKQLG APVEVLREIK RLGRLPVVNF AAGGVATPAD AALMMHLGAD GVFVGSGIFK 240
SENPEKYARA IVEATTHYED YELIAHLSKG LGGAMRGIDI ATLLPEHRMQ ERGW 294 
Gene Ontology
 GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
 GO:0042823; P:pyridoxal phosphate biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR013785; Aldolase_TIM.
 IPR011060; RibuloseP-bd_barrel.
 IPR001852; Snz1p/Sor1. 
Pfam
 PF01680; SOR_SNZ 
SMART
  
PROSITE
 PS01235; PDXS_SNZ_1
 PS51129; PDXS_SNZ_2 
PRINTS