CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031240
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 General transcription factor IIH subunit 4 
Protein Synonyms/Alias
 cDNA FLJ50212, highly similar to TFIIH basal transcription factor complex p52 subunit 
Gene Name
 GTF2H4 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
71IALLGGGKAWSDDTSubiquitination[1, 2, 3]
84TSQLGPDKHARDVPSubiquitination[1, 2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 220 AA 
Protein Sequence
MRMLFLEQPL PQAAVALWVK KEFSKAQEES TGLLSGLRIW HTQLLPGGLQ GLILNPIFRQ 60
NLRIALLGGG KAWSDDTSQL GPDKHARDVP SLDKYAEERW EVVLHFMVGS PSAAVSQDLA 120
QLLSQAGLMK STEPGEPPCI TSAGFQFLLL DTPAQLWYFM LQYLQTAQSR GMDLVEILSF 180
LFQLSFSTLG KDYSVEGMSD SLLNFLQHLR EFGLVFQRKV 220 
Gene Ontology
 GO:0000439; C:core TFIIH complex; IEA:InterPro.
 GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.
 GO:0006289; P:nucleotide-excision repair; IEA:InterPro. 
Interpro
 IPR004598; TFIIH_p52/Tfb2. 
Pfam
 PF03849; Tfb2 
SMART
  
PROSITE
  
PRINTS