CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009573
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 GTP-binding nuclear protein Ran 
Protein Synonyms/Alias
 GTPase Ran; Ras-like protein TC4; Ras-related nuclear protein 
Gene Name
 Ran 
Gene Synonyms/Alias
 Rasl2-8 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
23VGDGGTGKTTFVKRHacetylation[1, 2]
23VGDGGTGKTTFVKRHsuccinylation[2]
23VGDGGTGKTTFVKRHubiquitination[3]
28TGKTTFVKRHLTGEFacetylation[1]
37HLTGEFEKKYVATLGacetylation[1]
60HTNRGPIKFNVWDTAacetylation[1, 2]
60HTNRGPIKFNVWDTAubiquitination[3]
71WDTAGQEKFGGLRDGacetylation[2]
71WDTAGQEKFGGLRDGubiquitination[3]
99VTSRVTYKNVPNWHRacetylation[1, 2]
99VTSRVTYKNVPNWHRubiquitination[3]
123PIVLCGNKVDIKDRKacetylation[1]
127CGNKVDIKDRKVKAKubiquitination[3]
134KDRKVKAKSIVFHRKacetylation[2]
134KDRKVKAKSIVFHRKsuccinylation[2]
134KDRKVKAKSIVFHRKubiquitination[3]
142SIVFHRKKNLQYYDIacetylation[2, 4]
142SIVFHRKKNLQYYDIsuccinylation[2]
142SIVFHRKKNLQYYDIubiquitination[3]
152QYYDISAKSNYNFEKacetylation[4]
152QYYDISAKSNYNFEKubiquitination[3]
159KSNYNFEKPFLWLARacetylation[1, 2]
159KSNYNFEKPFLWLARsuccinylation[2]
159KSNYNFEKPFLWLARubiquitination[3]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [4] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377
Functional Description
 GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. The complex with BIRC5/survivin plays a role in mitotic spindle formation by serving as a physical scaffold to help deliver the RAN effector molecule TPX2 to microtubules. Acts as a negative regulator of the kinase activity of VRK1 and VRK2 (By similarity). 
Sequence Annotation
 NP_BIND 17 24 GTP (By similarity).
 NP_BIND 65 69 GTP (By similarity).
 NP_BIND 122 125 GTP (By similarity).
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 60 60 N6-acetyllysine (By similarity).
 MOD_RES 71 71 N6-acetyllysine; alternate (By
 MOD_RES 99 99 N6-acetyllysine (By similarity).
 MOD_RES 159 159 N6-acetyllysine (By similarity).
 CROSSLNK 71 71 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Cell cycle; Cell division; Complete proteome; Cytoplasm; Direct protein sequencing; GTP-binding; Isopeptide bond; Mitosis; Nucleotide-binding; Nucleus; Protein transport; Reference proteome; Transport; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 216 AA 
Protein Sequence
MAAQGEPQVQ FKLVLVGDGG TGKTTFVKRH LTGEFEKKYV ATLGVEVHPL VFHTNRGPIK 60
FNVWDTAGQE KFGGLRDGYY IQAQCAIIMF DVTSRVTYKN VPNWHRDLVR VCENIPIVLC 120
GNKVDIKDRK VKAKSIVFHR KKNLQYYDIS AKSNYNFEKP FLWLARKLIG DPNLEFVAMP 180
ALAPPEVVMD PALAAQYEHD LEVAQTTALP DEDDDL 216 
Gene Ontology
 GO:0000785; C:chromatin; IEA:Compara.
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0003924; F:GTPase activity; IEA:InterPro.
 GO:0030036; P:actin cytoskeleton organization; IMP:MGI.
 GO:0051301; P:cell division; IEA:UniProtKB-KW.
 GO:0034629; P:cellular protein complex localization; IMP:MGI.
 GO:0007067; P:mitosis; IEA:UniProtKB-KW.
 GO:0032092; P:positive regulation of protein binding; IEA:Compara.
 GO:0006606; P:protein import into nucleus; IDA:MGI.
 GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro. 
Interpro
 IPR027417; P-loop_NTPase.
 IPR002041; Ran_GTPase.
 IPR005225; Small_GTP-bd_dom.
 IPR001806; Small_GTPase. 
Pfam
 PF00071; Ras 
SMART
 SM00176; RAN 
PROSITE
 PS51418; RAN 
PRINTS
 PR00627; GTPRANTC4.