UniProt Accession

 RM04_HUMAN; Q9BYD3; A6NNV7; Q9BW07; Q9H4N2; Q9Y317 

Genbank Protein ID

 AB049635; AF132962; AC011511; CH471106; BC000756; BC009858; AY007152 

Genbank Nucleotide ID

 BAB40840.1; AAD27737.1; EAW84083.1; AAH00756.1; AAH09858.1; AAG02005.1 

Protein Name

 39S ribosomal protein L4, mitochondrial 

Protein Synonyms/Alias

 L4mt; MRP-L4 

Gene Name

 MRPL4 

Gene Synonyms/Alias

 CDABP0091; CGI-28 

Created Date

 July 27, 2013 

Organism

 Homo sapiens (Human) 

NCBI Taxa ID

 9606 

Lysine Modification

Position	Peptide	Type	References
50	LPEPVLRKVELPVPT	ubiquitination	[1]
104	HQVAMWQKNFKRISY	ubiquitination	[2, 3]
107	AMWQKNFKRISYAKT	ubiquitination	[1]
131	GRKPWPQKGTGRARH	ubiquitination	[1, 2, 3]
238	VEATSRLKTFNLIPA	ubiquitination	[1]

Reference

 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789] 

Functional Description

  

Sequence Annotation

  

Keyword

 Alternative splicing; Complete proteome; Mitochondrion; Reference proteome; Ribonucleoprotein; Ribosomal protein. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 311 AA 

Protein Sequence

Gene Ontology

 GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
 GO:0005840; C:ribosome; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0006412; P:translation; IEA:InterPro. 

Interpro

 IPR002136; Ribosomal_L4/L1e.
 IPR013005; Ribosomal_L4/L1e_bac-type.
 IPR023574; Ribosomal_L4_dom. 

Pfam

 PF00573; Ribosomal_L4 

SMART

  

PROSITE

  

PRINTS