CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-030782
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 WD repeat and SOCS box-containing protein 1 
Protein Synonyms/Alias
 cDNA FLJ58059, highly similar to WD repeat and SOCS box-containing protein 1 
Gene Name
 WSB1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
28SQGHRTVKLVPWSQCubiquitination[1]
170TLRVWDLKDDGNMMKubiquitination[1]
177KDDGNMMKVLRGHQNubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 213 AA 
Protein Sequence
MASFPPRVNE KEIDGSYFAW SQGHRTVKLV PWSQCLQNFL LHGTKNVTNS SSLRLPRQNS 60
DGGQKNKPRE HIIDCGDIVW SLAFGSSVPE KQSRCVNIEW HRFRFGQDQL LLATGLNNGR 120
IKIWDVYTGK LLLNLVDHTE VVRDLTFAPD GSLILVSASR DKTLRVWDLK DDGNMMKVLR 180
GHQNWVYSCA FSPDSSMLCS VGASKAVVAA ILV 213 
Gene Ontology
  
Interpro
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS