UniProt Accession

 RL13B_YEAST; P40212; D6VZW4 

Genbank Protein ID

 Z47071; BK006946 

Genbank Nucleotide ID

 CAA87356.1; DAA10038.1 

Protein Name

 60S ribosomal protein L13-B 

Protein Synonyms/Alias

  

Gene Name

 RPL13B 

Gene Synonyms/Alias

 RPL13; YMR142C; YM9375.11C 

Created Date

 July 27, 2013 

Organism

 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 

NCBI Taxa ID

 559292 

Lysine Modification

Position	Peptide	Type	References
11	SKNLPILKNHFRKHW	acetylation	[1]
31	VHFDQAGKKVSRRNA	acetylation	[1]
45	ARAARAAKIAPRPLD	ubiquitination	[2]
64	VVRAPTVKYNRKVRA	ubiquitination	[2]
81	GFTLAEVKAAGLTAA	ubiquitination	[2]
117	DANVQRLKEYQSKII	ubiquitination	[2]
122	RLKEYQSKIIVFPRD	acetylation	[1]
131	IVFPRDGKAPEAEQV	ubiquitination	[2, 3]

Reference

 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, Villén J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [3] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047] 

Functional Description

  

Sequence Annotation

 MOD_RES 144 144 Phosphothreonine.
 MOD_RES 152 152 Phosphothreonine.  

Keyword

 Complete proteome; Cytoplasm; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 199 AA 

Protein Sequence

Gene Ontology

 GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
 GO:0003735; F:structural constituent of ribosome; TAS:SGD.
 GO:0002181; P:cytoplasmic translation; TAS:SGD. 

Interpro

 IPR001380; Ribosomal_L13e.
 IPR018256; Ribosomal_L13e_CS. 

Pfam

 PF01294; Ribosomal_L13e 

SMART

  

PROSITE

 PS01104; RIBOSOMAL_L13E 

PRINTS