CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-032338
UniProt Accession
B8JJC1_MOUSE
;
B8JJC1
Genbank Protein ID
AC160931
;
CT010436
;
CH466549
Genbank Nucleotide ID
EDL18908.1
Protein Name
Tyrosyl-DNA phosphodiesterase 1
Protein Synonyms/Alias
Tyrosyl-DNA phosphodiesterase 1, isoform CRA_b
Gene Name
Tdp1
Gene Synonyms/Alias
mCG_14730
Created Date
July 27, 2013
Organism
Mus musculus (Mouse)
NCBI Taxa ID
10090
Lysine Modification
Position
Peptide
Type
References
127
PDVTTAQ
K
VVDRSPP
acetylation
[1]
Reference
[1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [
PMID: 22826441
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Reference proteome.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
609 AA
Protein Sequence
MSQESSYGKW TISSSDESED EKPKPDKPSA SSHPQAGQGV SKELIYTCSE ARKVAHKRQI 60
SPVKFNDADS VLPHKKQKSD SPEGLGWCLS SSDDDQQPDV TQQEQPKRVL PQEKKHVSSP 120
DVTTAQKVVD RSPPASLRPQ RADDEYETSG EGQDIWDMLD KGNPFQFYLT RVSGIKAKYN 180
SKALHIKDIL SPLFGTLVSS AQFNYCFDVD WLIKQYPPEF RKNPILLVHG DKREAKADLH 240
AQAKPYANIS LCQAKLDIAF GTHHTKMMLL LYEEGLRVVI HTSNLIREDW HQKTQGIWLS 300
PLYPRIDQGS HTAGESSTRF KADLTSYLTA YNAPPLQEWI DIIQEHDLSE TNVYLIGSTP 360
GRFQGSHRDN WGHFRLRKLL QAHAPSTPKG ECWPIVGQFS SIGSLGPDES KWLCSEFKDS 420
LLALREEGRP PGKSAVPLHL IYPSVENVRT SLEGYPAGGS LPYSIQTAEK QRWLHSYFHK 480
WSAETSGRSN AMPHIKTYMR PSPDFSKLAW FLVTSANLSK AAWGALEKNG TQLMIRSYEL 540
GVLFLPSAFG LDTFKVKQKF FSSSCEPTAS FPVPYDLPPE LYGSKDRPWI WNIPYVKAPD 600
THGNMWVPS 609
Gene Ontology
GO:0005634
; C:nucleus; IDA:MGI.
GO:0017005
; F:3'-tyrosyl-DNA phosphodiesterase activity; IEA:Compara.
GO:0003690
; F:double-stranded DNA binding; IEA:Compara.
GO:0003697
; F:single-stranded DNA binding; IEA:Compara.
GO:0006302
; P:double-strand break repair; IEA:Compara.
GO:0000012
; P:single strand break repair; IMP:MGI.
Interpro
IPR027415
; TDP_C.
IPR010347
; Tyr-DNA_phospho.
Pfam
PF06087
; Tyr-DNA_phospho
SMART
PROSITE
PRINTS