CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-001642
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease P protein subunit p29 
Protein Synonyms/Alias
 hPOP4 
Gene Name
 POP4 
Gene Synonyms/Alias
 RPP29 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
12IYHALSQKEANDSDVubiquitination[1]
90ELRLFDIKPEQQRYSubiquitination[1, 2]
118RDLCSGLKPDTQPQMubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. May function with RPP38 to coordinate the nucleolar targeting and/or assembly of RNase P. 
Sequence Annotation
 MOD_RES 10 10 Phosphoserine.  
Keyword
 Complete proteome; Direct protein sequencing; Hydrolase; Nucleus; Phosphoprotein; Reference proteome; tRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 220 AA 
Protein Sequence
MKSVIYHALS QKEANDSDVQ PSGAQRAEAF VRAFLKRSTP RMSPQAREDQ LQRKAVVLEY 60
FTRHKRKEKK KKAKGLSARQ RRELRLFDIK PEQQRYSLFL PLHELWKQYI RDLCSGLKPD 120
TQPQMIQAKL LKADLHGAII SVTKSKCPSY VGITGILLQE TKHIFKIITK EDRLKVIPKL 180
NCVFTVETDG FISYIYGSKF QLRSSERSAK KFKAKGTIDL 220 
Gene Ontology
 GO:0005655; C:nucleolar ribonuclease P complex; IEA:InterPro.
 GO:0000172; C:ribonuclease MRP complex; TAS:ProtInc.
 GO:0004526; F:ribonuclease P activity; TAS:ProtInc.
 GO:0003723; F:RNA binding; TAS:ProtInc.
 GO:0006379; P:mRNA cleavage; IEA:InterPro.
 GO:0006364; P:rRNA processing; TAS:ProtInc.
 GO:0008033; P:tRNA processing; TAS:ProtInc. 
Interpro
 IPR002730; RNase_P/MRP_p29.
 IPR016848; RNase_P/MRP_p29-subunit.
 IPR023534; Rof/RNase_P-like. 
Pfam
 PF01868; UPF0086 
SMART
 SM00538; POP4 
PROSITE
  
PRINTS