CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018781
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Run domain Beclin-1 interacting and cysteine-rich containing protein 
Protein Synonyms/Alias
 Rubicon; Beclin-1 associated RUN domain containing protein; Baron 
Gene Name
 KIAA0226 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
50NSPNVWSKYGGLERLubiquitination[1]
194DASMFARKHESPLLVubiquitination[1]
682GQHADIYKLRIRVRGubiquitination[1]
716TRKIAVAKQNYRCAGubiquitination[1]
734RTDPDYIKRLRYCEYubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Negatively regulates endocytic trafficking. Impairs the autophagosome maturation process. May inhibit PIK3C3 activity (By similarity). 
Sequence Annotation
 DOMAIN 48 189 RUN.
 MOD_RES 197 197 Phosphoserine.
 MOD_RES 266 266 Phosphoserine.
 MOD_RES 388 388 Phosphoserine (By similarity).
 MOD_RES 410 410 Phosphoserine (By similarity).
 MOD_RES 528 528 Phosphoserine.
 MOD_RES 671 671 Phosphoserine.  
Keyword
 Alternative splicing; Autophagy; Complete proteome; Endocytosis; Endosome; Lysosome; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 972 AA 
Protein Sequence
MRPEGAGMEL GGGEERLPEE SRREHWQLLG NLKTTVEGLV STNSPNVWSK YGGLERLCRD 60
MQSILYHGLI RDQACRRQTD YWQFVKDIRW LSPHSALHVE KFISVHENDQ SSADGASERA 120
VAELWLQHSL QYHCLSAQLR PLLGDRQYIR KFYTDAAFLL SDAHVTAMLQ CLEAVEQNNP 180
RLLAQIDASM FARKHESPLL VTKSQSLTAL PSSTYTPPNS YAQHSYFGSF SSLHQSVPNN 240
GSERRSTSFP LSGPPRKPQE SRGHVSPAED QTIQAPPVSV SALARDSPLT PNEMSSSTLT 300
SPIEASWVSS QNDSPGDASE GPEYLAIGNL DPRGRTASCQ SHSSNAESSS SNLFSSSSSQ 360
KPDSAASSLG DQEGGGESQL SSVLRRSSFS EGQTLTVTSG AKKSHIRSHS DTSIASRGAP 420
ESCNDKAKLR GPLPYSGQSS EVSTPSSLYM EYEGGRYLCS GEGMFRRPSE GQSLISYLSE 480
QDFGSCADLE KENAHFSISE SLIAAIELMK CNMMSQCLEE EEVEEEDSDR EIQELKQKIR 540
LRRQQIRTKN LLPMYQEAEH GSFRVTSSSS QFSSRDSAQL SDSGSADEVD EFEIQDADIR 600
RNTASSSKSF VSSQSFSHCF LHSTSAEAVA MGLLKQFEGM QLPAASELEW LVPEHDAPQK 660
LLPIPDSLPI SPDDGQHADI YKLRIRVRGN LEWAPPRPQI IFNVHPAPTR KIAVAKQNYR 720
CAGCGIRTDP DYIKRLRYCE YLGKYFCQCC HENAQMAIPS RVLRKWDFSK YYVSNFSKDL 780
LIKIWNDPLF NVQDINSALY RKVKLLNQVR LLRVQLCHMK NMFKTCRLAK ELLDSFDTVP 840
GHLTEDLHLY SLNDLTATRK GELGPRLAEL TRAGATHVER CMLCQAKGFI CEFCQNEDDI 900
IFPFELHKCR TCEECKACYH KACFKSGSCP RCERLQARRE ALARQSLESY LSDYEEEPAE 960
ALALEAAVLE AT 972 
Gene Ontology
 GO:0005769; C:early endosome; IDA:UniProtKB.
 GO:0005770; C:late endosome; IDA:UniProtKB.
 GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.
 GO:0006914; P:autophagy; IEA:UniProtKB-KW.
 GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
 GO:0010507; P:negative regulation of autophagy; IMP:UniProtKB.
 GO:0045806; P:negative regulation of endocytosis; IMP:UniProtKB. 
Interpro
 IPR025258; DUF4206.
 IPR004012; Run. 
Pfam
 PF13901; DUF4206
 PF02759; RUN 
SMART
 SM00593; RUN 
PROSITE
 PS50826; RUN 
PRINTS