CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012493
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Neutrophil cytosol factor 4 
Protein Synonyms/Alias
 NCF-4; Neutrophil NADPH oxidase factor 4; SH3 and PX domain-containing protein 4; p40-phox; p40phox 
Gene Name
 NCF4 
Gene Synonyms/Alias
 SH3PXD4 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
225IFPLSFVKILKDFPEubiquitination[1, 2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Component of the NADPH-oxidase, a multicomponent enzyme system responsible for the oxidative burst in which electrons are transported from NADPH to molecular oxygen, generating reactive oxidant intermediates. It may be important for the assembly and/or activation of the NADPH-oxidase complex. 
Sequence Annotation
 DOMAIN 19 140 PX.
 DOMAIN 170 229 SH3.
 DOMAIN 237 329 OPR.
 MOD_RES 154 154 Phosphothreonine.
 MOD_RES 315 315 Phosphoserine.  
Keyword
 3D-structure; Alternative splicing; Chronic granulomatous disease; Complete proteome; Cytoplasm; Direct protein sequencing; Disease mutation; Phosphoprotein; Polymorphism; Reference proteome; SH3 domain. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 339 AA 
Protein Sequence
MAVAQQLRAE SDFEQLPDDV AISANIADIE EKRGFTSHFV FVIEVKTKGG SKYLIYRRYR 60
QFHALQSKLE ERFGPDSKSS ALACTLPTLP AKVYVGVKQE IAEMRIPALN AYMKSLLSLP 120
VWVLMDEDVR IFFYQSPYDS EQVPQALRRL RPRTRKVKSV SPQGNSVDRM AAPRAEALFD 180
FTGNSKLELN FKAGDVIFLL SRINKDWLEG TVRGATGIFP LSFVKILKDF PEEDDPTNWL 240
RCYYYEDTIS TIKDIAVEED LSSTPLLKDL LELTRREFQR EDIALNYRDA EGDLVRLLSD 300
EDVALMVRQA RGLPSQKRLF PWKLHITQKD NYRVYNTMP 339 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0043020; C:NADPH oxidase complex; IDA:UniProtKB.
 GO:0032010; C:phagolysosome; TAS:Reactome.
 GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.
 GO:0046983; F:protein dimerization activity; TAS:UniProtKB.
 GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.
 GO:0007154; P:cell communication; IEA:InterPro.
 GO:0006955; P:immune response; TAS:UniProtKB.
 GO:0051701; P:interaction with host; TAS:Reactome.
 GO:0055114; P:oxidation-reduction process; TAS:UniProtKB.
 GO:0090382; P:phagosome maturation; TAS:Reactome. 
Interpro
 IPR000919; NCF_P40.
 IPR000270; OPR_PB1.
 IPR001683; Phox.
 IPR001452; SH3_domain. 
Pfam
 PF00564; PB1
 PF00787; PX
 PF00018; SH3_1 
SMART
 SM00666; PB1
 SM00312; PX
 SM00326; SH3 
PROSITE
 PS50195; PX
 PS50002; SH3 
PRINTS
 PR00497; P40PHOX.