CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016627
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA-binding motif, single-stranded-interacting protein 3 
Protein Synonyms/Alias
  
Gene Name
 Rbms3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
161DSPAAAQKAVASLKAubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Binds poly(A) and poly(U) oligoribonucleotides (By similarity). 
Sequence Annotation
 DOMAIN 56 129 RRM 1.
 DOMAIN 135 220 RRM 2.  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Reference proteome; Repeat; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 431 AA 
Protein Sequence
MEGGRLLIRS NANGVTQSNS TVRAYQSSKS RVTMSPGFSS QWSNSQPAWN TYSFPRASLH 60
YQSHASYTYC TGHPVSYAPA PHPMAPPSPS TNSSSNSSGE QLSKTNLYIR GLPPGTTDQD 120
LIKLCQPYGK IVSTKAILDK NTNQCKGYGF VDFDSPAAAQ KAVASLKANG VQAQMAKQQE 180
QDPTNLYISN LPISMDEQEL ENMLKPFGHV ISTRILRDAN GVSRGVGFAR MESTEKCEVV 240
IQHFNGKYLK TPPGIPAPSE PLLCKFADGG QKKRQGQSKH TQNGRPWPRE GEAGMALTYD 300
PTAALQNGFY SSPYSLATNR MIPQTSITPF IAASPVSTYQ GAVITPAVDH PMSMQPTNIV 360
GPLTQQMNHL SLGTAGTIQS QDRIMVLHQL LCQYMTAAPM QGTYIPQYTP VPPTAVSIEG 420
VVADTSPQTV APSSQDSSGQ QQQLAVDTPS EHAPAYSFQQ SKP 463 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0043231; C:intracellular membrane-bounded organelle; IEA:Compara.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW. 
Interpro
 IPR002343; Hud_Sxl_RNA.
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS
 PR00961; HUDSXLRNA.