CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003170
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Isocitrate lyase 
Protein Synonyms/Alias
 ICL; Isocitrase; Isocitratase 
Gene Name
 aceA 
Gene Synonyms/Alias
 icl; b4015; JW3975 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
13QQIEELQKEWTQPRWacetylation[1, 2]
34YSAEDVVKLRGSVNPacetylation[1, 2]
52LAQLGAAKMWRLLHGacetylation[1]
62RLLHGESKKGYINSLacetylation[1]
193EDQLASVKKCGHMGGacetylation[1, 2]
194DQLASVKKCGHMGGKacetylation[1]
201KCGHMGGKVLVPTQEacetylation[1, 2]
212PTQEAIQKLVAARLAacetylation[1, 3]
308FAQAIHAKYPGKLLAacetylation[1, 2]
312IHAKYPGKLLAYNCSacetylation[1]
326SPSFNWQKNLDDKTIacetylation[1, 2]
331WQKNLDDKTIASFQQacetylation[1, 2]
381GMKHYVEKVQQPEFAacetylation[1, 2]
391QPEFAAAKDGYTFVSacetylation[1, 2]
Reference
 [1] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111]
 [2] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [3] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508
Functional Description
 Catalyzes the formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle. May be involved in the assimilation of one-carbon compounds via the isocitrate lyase- positive serine pathway (By similarity). 
Sequence Annotation
 ACT_SITE 195 195 Probable.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Glyoxylate bypass; Lyase; Phosphoprotein; Reference proteome; Tricarboxylic acid cycle. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 434 AA 
Protein Sequence
MKTRTQQIEE LQKEWTQPRW EGITRPYSAE DVVKLRGSVN PECTLAQLGA AKMWRLLHGE 60
SKKGYINSLG ALTGGQALQQ AKAGIEAVYL SGWQVAADAN LAASMYPDQS LYPANSVPAV 120
VERINNTFRR ADQIQWSAGI EPGDPRYVDY FLPIVADAEA GFGGVLNAFE LMKAMIEAGA 180
AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLVAARLAA DVTGVPTLLV ARTDADAADL 240
ITSDCDPYDS EFITGERTSE GFFRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR 300
FAQAIHAKYP GKLLAYNCSP SFNWQKNLDD KTIASFQQQL SDMGYKFQFI TLAGIHSMWF 360
NMFDLANAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGTS 420
SVTALTGSTE ESQF 434 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0043169; F:cation binding; IDA:EcoliWiki.
 GO:0004451; F:isocitrate lyase activity; IDA:EcoliWiki.
 GO:0006097; P:glyoxylate cycle; IC:EcoliWiki.
 GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW. 
Interpro
 IPR006254; Isocitrate_lyase.
 IPR000918; Isocitrate_lyase/Pmutase.
 IPR018523; Isocitrate_lyase_ph_CS.
 IPR015813; Pyrv/PenolPyrv_Kinase-like_dom. 
Pfam
 PF00463; ICL 
SMART
  
PROSITE
 PS00161; ISOCITRATE_LYASE 
PRINTS