CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031515
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Syndecan 
Protein Synonyms/Alias
  
Gene Name
 SDC4 
Gene Synonyms/Alias
 hCG_38363 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
118GKKPIYKKAPTNEFYubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 Cell surface proteoglycan (By similarity). 
Sequence Annotation
  
Keyword
 Complete proteome; Glycoprotein; Heparan sulfate; Membrane; Proteoglycan; Reference proteome; Transmembrane. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 126 AA 
Protein Sequence
MIGPEVVHPL VPLDNHIPER AGSGSQVPTE PKKLEENEVI PKRISPVEES EDVSNKVSMS 60
STVQGSNIFE RTEVLAALIV GGIVGILFAV FLILLLMYRM KKKDEGSYDL GKKPIYKKAP 120
TNEFYA 126 
Gene Ontology
 GO:0009986; C:cell surface; IEA:Compara.
 GO:0043034; C:costamere; IEA:Compara.
 GO:0005925; C:focal adhesion; IEA:Compara.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0045121; C:membrane raft; IEA:Compara.
 GO:0051894; P:positive regulation of focal adhesion assembly; IEA:Compara.
 GO:0045860; P:positive regulation of protein kinase activity; IEA:Compara.
 GO:0051496; P:positive regulation of stress fiber assembly; IEA:Compara.
 GO:0001657; P:ureteric bud development; IEA:Compara. 
Interpro
 IPR003585; Neurexin-like.
 IPR001050; Syndecan. 
Pfam
 PF01034; Syndecan 
SMART
 SM00294; 4.1m 
PROSITE
 PS00964; SYNDECAN 
PRINTS