CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024736
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 3-hydroxybutyrate dehydrogenase type 2 
Protein Synonyms/Alias
 Dehydrogenase/reductase SDR family member 6; R-beta-hydroxybutyrate dehydrogenase 
Gene Name
 Bdh2 
Gene Synonyms/Alias
 Dhrs6 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
42ATDINEAKLQELENYacetylation[1]
61TRVLDVTKKRQIDQFacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Dehydrogenase that mediates the formation of 2,5- dihydroxybenzoic acid (2,5-DHBA), a siderophore that shares structural similarities with bacterial enterobactin and associates with LCN2, thereby playing a key role in iron homeostasis and transport. Also acts as a 3-hydroxybutyrate dehydrogenase (By similarity). 
Sequence Annotation
 NP_BIND 10 37 NAD (By similarity).
 NP_BIND 180 184 NAD (By similarity).
 ACT_SITE 147 147 Proton acceptor (By similarity).
 BINDING 58 58 NAD (By similarity).
 BINDING 144 144 Substrate (By similarity).
 BINDING 151 151 NAD (By similarity).
 BINDING 188 188 Substrate (By similarity).
 BINDING 205 205 Substrate (By similarity).  
Keyword
 Complete proteome; Cytoplasm; NAD; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 245 AA 
Protein Sequence
MGRLEGKVIV LTAAAQGIGR ASALAFAREG AKVIATDINE AKLQELENYP GIQTRVLDVT 60
KKRQIDQFAS EIEKIDVLFN VAGFVHHGTI LDCEEKDWDF SMNLNVRSMY LMIKAFLPKM 120
LAQKSGNIIN MSSVASSIKG VENRCVYSAT KAAVIGLTKS VAADFIQQGI RCNCVCPGTV 180
DTPSLQERIQ ARDDPKEALK AFLNRQKTGR FASAEEVALL CVYLASDESA YVTGTPVVID 240
GGWSL 245 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0003858; F:3-hydroxybutyrate dehydrogenase activity; IEA:EC.
 GO:0051287; F:NAD binding; IEA:Compara.
 GO:0016628; F:oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor; ISS:UniProtKB.
 GO:0006635; P:fatty acid beta-oxidation; IEA:Compara.
 GO:0042168; P:heme metabolic process; ISS:UniProtKB.
 GO:0055072; P:iron ion homeostasis; ISS:UniProtKB.
 GO:0019290; P:siderophore biosynthetic process; ISS:UniProtKB. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom.
 IPR020904; Sc_DH/Rdtase_CS. 
Pfam
  
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.