CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041435
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Spermatogenesis-defective protein 39 homolog 
Protein Synonyms/Alias
  
Gene Name
 VIPAS39 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
31GLRMNRTKGDEEEYWubiquitination[1]
42EEYWNSSKFKAFTFDubiquitination[1]
59DDELSQLKESKRAVNubiquitination[1]
62LSQLKESKRAVNSLRubiquitination[1]
171APELGRPKGEYRDYSubiquitination[1]
194VRRLRKGKVCSLERFubiquitination[1]
389VNLKKTFKIPDKQYVubiquitination[1]
419VDALFTTKNWLGYTKubiquitination[1]
469TKLNLATKFKCHDVVubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 519 AA 
Protein Sequence
MTTGLILFFQ SGRPLGAGVR LGLGLRMNRT KGDEEEYWNS SKFKAFTFDD EDDELSQLKE 60
SKRAVNSLRD FVDDDDDDDL ERVSWSGEPV GSISWSIRET AGNSGSTHEG REQLKSRNSF 120
SSYAQLPKPT STYSLSSFFR GRTRPGSFQS LSDALSDTPA KSYAPELGRP KGEYRDYSND 180
WSPSDTVRRL RKGKVCSLER FRSLQDKLQL LEEAVSMHDG NVITAVLIFL KRTLSKEILF 240
RELEVRQVAL RHLIHFLKEI GDQKLLLDLF RFLDRTEELA LSHYREHLNI QDPDKRKEFL 300
KTCVGLPFSA EDSAHIQDHY TLLERQIIIE ANDRHLESAG QTEIFRKHPR KASILNMPLV 360
TTLFYSCFYH YTEAEGTFSS PVNLKKTFKI PDKQYVLTAL AARAKLRAWN DVDALFTTKN 420
WLGYTKKRAP IGFHRVVEIL HKNNAPVQIL QEYVNLVEDV DTKLNLATKF KCHDVVIDTY 480
RDLKDRQQLL AYRSKVDKGS AEEEKIDALL SSSQIRWKN 519 
Gene Ontology
  
Interpro
 IPR019177; Golgin_subfamily_A_member_5. 
Pfam
 PF09787; Golgin_A5 
SMART
  
PROSITE
  
PRINTS