CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026719
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA topoisomerase 
Protein Synonyms/Alias
  
Gene Name
 parE 
Gene Synonyms/Alias
 RPA2486 
Created Date
 July 27, 2013 
Organism
 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) 
NCBI Taxa ID
 258594 
Lysine Modification
Position
Peptide
Type
References
585YRLTHGAKTVYARDDacetylation[1]
626EMMPAQLKETTMDPAacetylation[1]
Reference
 [1] System-wide studies of N-lysine acetylation in Rhodopseudomonas palustris reveal substrate specificity of protein acetyltransferases.
 Crosby HA, Pelletier DA, Hurst GB, Escalante-Semerena JC.
 J Biol Chem. 2012 May 4;287(19):15590-601. [PMID: 22416131
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Isomerase; Nucleotide-binding; Topoisomerase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 683 AA 
Protein Sequence
MAKALKASSK SKSGDDLFEG APKSAAPKAP AKPSGAEDGY TAADIEVLEG LEPVRRRPGM 60
YIGGTDEKAL HHLFAEVIDN SMDEALAGHA TFIEVELTAD GFLTVSDNGR GIPVDPHPKF 120
PKKSALEVIM CTLHAGGKFD SKVYETSGGL HGVGVSVVNA LSSRLEVEVA RGQQLHRMVF 180
ERGHPKGKLE SLGKVNNRRG TRVRFKPDTE IFGAKAAFKP QRLFKMARSK AYLFGGVKIR 240
WKCDPELLKG IEDVPAEDEF HFPGGLKDFL GAAIHNDTLV HPDIFAGKSG RNGAHGACEW 300
AAAWTADADG FLSSYCNTVP TPDGGTHESG LRSALLRGLK DHAERAGQGK RASSITSEDV 360
MVGAAIMLSV FVREPEFQGQ TKDRLATAEA QKIVEQAIKD PFDHWLSGNP VQANKLLDFV 420
IERAEERLRR RQEKEISRKT AVKKLRLPGK LADCTSTAAE GSELFIVEGD SAGGSAKQAR 480
DRSTQAVLPL RGKILNVASA GKDKVVANAQ LSDLIQALGV STGVNYREED LRYSRIIIMT 540
DADVDGAHIA SLLITFFYRQ MPKLIDEGHL YLAVPPLYRL THGAKTVYAR DDAHKEELLK 600
KEFNANAKVE VGRFKGLGEM MPAQLKETTM DPAKRTMLRV VLLPDDRDGT ANSVERLMGT 660
KAEARFAFIS EKAEFASDEL LDV 683 
Gene Ontology
 GO:0005694; C:chromosome; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003918; F:DNA topoisomerase type II (ATP-hydrolyzing) activity; IEA:EC.
 GO:0006265; P:DNA topological change; IEA:InterPro. 
Interpro
 IPR002288; DNA_gyrase_B_C.
 IPR003594; HATPase_ATP-bd.
 IPR020568; Ribosomal_S5_D2-typ_fold.
 IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
 IPR001241; Topo_IIA.
 IPR013506; Topo_IIA_bsu_dom2.
 IPR013759; Topo_IIA_cen_dom.
 IPR013760; Topo_IIA_like_dom.
 IPR018522; TopoIIA_CS.
 IPR005737; TopoIV_B_Gneg.
 IPR006171; Toprim_domain. 
Pfam
 PF00204; DNA_gyraseB
 PF00986; DNA_gyraseB_C
 PF02518; HATPase_c
 PF01751; Toprim 
SMART
 SM00387; HATPase_c
 SM00433; TOP2c 
PROSITE
 PS00177; TOPOISOMERASE_II 
PRINTS
 PR00418; TPI2FAMILY.