CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005739
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 T-cell surface glycoprotein CD1b 
Protein Synonyms/Alias
 CD1b 
Gene Name
 CD1B 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
145GLDFLSVKNASCVPSubiquitination[1]
196LGVLNAGKADLQRQVubiquitination[1, 2]
204ADLQRQVKPEAWLSSubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
 Antigen-presenting protein that binds self and non-self lipid and glycolipid antigens and presents them to T-cell receptors on natural killer T-cells. 
Sequence Annotation
 DOMAIN 185 295 Ig-like.
 MOTIF 329 332 Internalization signal.
 CARBOHYD 38 38 N-linked (GlcNAc...).
 CARBOHYD 75 75 N-linked (GlcNAc...).
 CARBOHYD 146 146 N-linked (GlcNAc...) (Potential).
 CARBOHYD 258 258 N-linked (GlcNAc...) (Potential).
 DISULFID 120 184
 DISULFID 149 163
 DISULFID 224 279  
Keyword
 3D-structure; Adaptive immunity; Alternative splicing; Cell membrane; Complete proteome; Disulfide bond; Endosome; Glycoprotein; Immunity; Immunoglobulin domain; Lysosome; Membrane; Reference proteome; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 333 AA 
Protein Sequence
MLLLPFQLLA VLFPGGNSEH AFQGPTSFHV IQTSSFTNST WAQTQGSGWL DDLQIHGWDS 60
DSGTAIFLKP WSKGNFSDKE VAELEEIFRV YIFGFAREVQ DFAGDFQMKY PFEIQGIAGC 120
ELHSGGAIVS FLRGALGGLD FLSVKNASCV PSPEGGSRAQ KFCALIIQYQ GIMETVRILL 180
YETCPRYLLG VLNAGKADLQ RQVKPEAWLS SGPSPGPGRL QLVCHVSGFY PKPVWVMWMR 240
GEQEQQGTQL GDILPNANWT WYLRATLDVA DGEAAGLSCR VKHSSLEGQD IILYWRNPTS 300
IGSIVLAIIV PSLLLLLCLA LWYMRRRSYQ NIP 333 
Gene Ontology
 GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; TAS:ProtInc.
 GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
 GO:0005886; C:plasma membrane; TAS:ProtInc.
 GO:0019882; P:antigen processing and presentation; IEA:InterPro.
 GO:0006955; P:immune response; IEA:InterPro. 
Interpro
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003597; Ig_C1-set.
 IPR011161; MHC_I-like_Ag-recog.
 IPR011162; MHC_I/II-like_Ag-recog. 
Pfam
 PF07654; C1-set 
SMART
 SM00407; IGc1 
PROSITE
 PS50835; IG_LIKE 
PRINTS