Tag | Content |
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CPLM ID | CPLM-014534 |
UniProt Accession | |
Genbank Protein ID | |
Genbank Nucleotide ID | |
Protein Name | PHD and RING finger domain-containing protein 1 |
Protein Synonyms/Alias | CTD-binding SR-like protein rA9 |
Gene Name | Phrf1 |
Gene Synonyms/Alias | |
Created Date | July 27, 2013 |
Organism | Rattus norvegicus (Rat) |
NCBI Taxa ID | 10116 |
Lysine Modification | Position | Peptide | Type | References |
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823 | PSPLFSIKKPKQLKS | acetylation | [1] |
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Reference | [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV. Cell Rep. 2012 Aug 30;2(2):419-31. [ PMID: 22902405] |
Functional Description | |
Sequence Annotation | ZN_FING 109 150 RING-type; degenerate. ZN_FING 188 238 PHD-type. MOD_RES 335 335 Phosphothreonine (By similarity). MOD_RES 460 460 Phosphoserine (By similarity). MOD_RES 867 867 Phosphoserine (By similarity). MOD_RES 870 870 Phosphoserine (By similarity). MOD_RES 922 922 Phosphoserine (By similarity). MOD_RES 948 948 Phosphoserine (By similarity). MOD_RES 1002 1002 Phosphoserine (By similarity). MOD_RES 1044 1044 Phosphoserine (By similarity). MOD_RES 1046 1046 Phosphoserine (By similarity). MOD_RES 1138 1138 Phosphoserine (By similarity). MOD_RES 1139 1139 Phosphoserine (By similarity). MOD_RES 1205 1205 Phosphoserine (By similarity). MOD_RES 1372 1372 Phosphoserine (By similarity). MOD_RES 1383 1383 Phosphoserine (By similarity). MOD_RES 1416 1416 Phosphothreonine (By similarity). |
Keyword | Alternative splicing; Coiled coil; Complete proteome; Metal-binding; Phosphoprotein; Reference proteome; Zinc; Zinc-finger. |
Sequence Source | UniProt (SWISSPROT/TrEMBL); GenBank; EMBL |
Protein Length | 1685 AA |
Protein Sequence | MDDDNLDELV AHSPGPDGPP QVGSSELASD AEESSNGHSE DSEDDTGSEQ DDDTDGEETE 60 GLSEEEDPED RSGSEDSEDG IEVPTAAVET QRKLEASSTP NSDDDAESCP ICLNAFRDQA 120 VGTPETCAHY FCLDCIIEWS RNANSCPVDR TIFKCICIRA QFNGKILKKI PVENTRACED 180 EEAEEEDPTF CEVCGRSDRE DRLLLCDGCD AGYHMECLDP PLQEVPVDEW FCPECAVPGV 240 DPTHDAAPVS DEEVSLLLAD VVPTTSRLRP RVGRTRAIAR TRQSERVRAT VNRNRISSAR 300 RVQHVPRYLM SSLLDETIEA VATGLSTAVY QRPLTPRVPA KRKRKAGRRK KVLGRKKTRS 360 RSSVKSKSGG TRAKKRQHRV RRTKGRKLKN EVTARSRIAR TLGLRRPVRG TSMPSVYKPV 420 DPSLGLMRAD IGAASLSLFG DPYALDPFDS NGEQSADPPS PLSAKRRVLS RSALQSHQPV 480 ARPVAMGLAR RQLPAVAPEP SVEEAPVPDL LGSILCGQSL LMMSSADVVI HRDGSLSAKR 540 AAPVSLQRNS VTQSREESRL RDNLQPGALP SESVSGGLIG DRRPNSGLSC GDRTALRCLP 600 AQIVQTPVRS DSSVTPRSGL SGNLSDESRP KWKHSNSPRL NGSNVRVGSA STKTMTHSNF 660 PSKNIAPGHP QKTDPRRPDF SKLPRIPKIR RDGSNSTQDQ APASGQTVEL PSACISRLTG 720 REGPGQPGRG RADSEPSSRG PQETGSHTSG SRPPAPSSHG NLAPLGPSRG KGIGSSFESF 780 RINIPGNTAH CSQLSSPGFC NTFRPVDSKV QRKENPSPLF SIKKPKQLKS EIYDPFDPTG 840 SDSSPPSSSP ESLGSGLLPS EITRTISINS PKAPAFQTVR CVTSYRVESV FGTEMDPDPQ 900 PPGEPVSGML ELLGKGPAEG ASDLEQEGLG EIEPTEIQGS SARAQRPSPP DPWDDEDGVS 960 CTPFFGSEER TVTCVTVEEP SVPSPDAPQI TTHRIVEFRA SSRSRSTSSS RSRKKTKKKK 1020 KVAREHQRTR SSTRSGSRDR TSRSVSPFTE EHTKRHRAKT KSRRSSSDRA SSQDRAKRRK 1080 DRDREHRRGP WGHGRCWRKS RSRSGSPGSS SCERHESRRR KRRHSGSRSR GRDGSPHSSL 1140 ERDRRHKHRE RSRERMDKKE SMTRSRERRR WRSRSPSVEH RTRRPHSREK HPHSPEKKGA 1200 VREVSPAPAP QGEPRQDGDH STKPPVSEVS VLPEVVSVLP EVVVADLNPP EVPPVLAESV 1260 SCVPEDLDYG DSVEAGHVFE DFSNEAIFIQ LDDMSSPPSP ESTDSSPERD FLPNPILPPA 1320 SLPQNSTLPV TQREVLPIHS EDISKPAPQP LAPSDQCLLR QDTVETTATT LSTPGVLPMG 1380 KDSPLLSGRG CEVVRPKDAV APAPLLRSRT LVKRVTWNLQ EAEASTPALD RDPRTPLQRP 1440 QRPQEGDWDA EDRALIGFQQ APFSELPPPI HVLQESGLPD ADPSQPPGVP RAEGPPAVGT 1500 LHSAGGILAQ VYSPNMPPPL AQPSSIPPYA LVNQPSVQLI LQGTLPLASC GAAQNLAPVP 1560 TMPATASELA VPTTNNSEER TATPKTAAEK TKKEEYMKKL HMQERAVEEV KLAIKPFYQK 1620 REVTKEEYKD ILRKAVQKIC HSKSGEINPV KVANLVKAYV DKYRHMRKHK KTEAGEEPPT 1680 QGAET 1685 |
Gene Ontology | GO:0019904; F:protein domain specific binding; IMP:RGD. GO:0008270; F:zinc ion binding; IEA:InterPro. GO:0006397; P:mRNA processing; IMP:RGD. GO:0006366; P:transcription from RNA polymerase II promoter; IMP:RGD. |
Interpro | |
Pfam | |
SMART | |
PROSITE | |
PRINTS | |