CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022293
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Thioredoxin-like protein 4B 
Protein Synonyms/Alias
 Dim1-like protein 
Gene Name
 TXNL4B 
Gene Synonyms/Alias
 DIM2; DLP 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
7*MSFLLPKLTSKKEVubiquitination[1, 2]
24AIKSTAEKVLVLRFGubiquitination[2]
47QLDDILSKTSSDLSKubiquitination[2]
127YRGAMRGKLIVQSPIubiquitination[2]
Reference
 [1] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Essential role in pre-mRNA splicing. Required in cell cycle progression for S/G(2) transition. 
Sequence Annotation
  
Keyword
 3D-structure; Cell cycle; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 149 AA 
Protein Sequence
MSFLLPKLTS KKEVDQAIKS TAEKVLVLRF GRDEDPVCLQ LDDILSKTSS DLSKMAAIYL 60
VDVDQTAVYT QYFDISYIPS TVFFFNGQHM KVDYGSPDHT KFVGSFKTKQ DFIDLIEVIY 120
RGAMRGKLIV QSPIDPKNIP KYDLLYQDI 149 
Gene Ontology
 GO:0005681; C:spliceosomal complex; IEA:InterPro.
 GO:0007067; P:mitosis; IEA:InterPro.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR004123; mRNA_splic_U5.
 IPR012336; Thioredoxin-like_fold. 
Pfam
 PF02966; DIM1 
SMART
  
PROSITE
  
PRINTS