CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019689
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein Synonyms/Alias
 DHBP synthase 
Gene Name
 RIB3 
Gene Synonyms/Alias
 YDR487C; D8035.30 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
190NDCQAFGKKHGIPLIacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity). 
Sequence Annotation
 REGION 26 27 Substrate binding (By similarity).
 REGION 145 149 Substrate binding (By similarity).
 METAL 27 27 Magnesium or manganese 1 (By similarity).
 METAL 27 27 Magnesium or manganese 2 (By similarity).
 METAL 148 148 Magnesium or manganese 2 (By similarity).
 BINDING 31 31 Substrate (By similarity).
 BINDING 169 169 Substrate (By similarity).
 MOD_RES 3 3 Phosphothreonine.  
Keyword
 Complete proteome; Lyase; Magnesium; Manganese; Metal-binding; Phosphoprotein; Reference proteome; Riboflavin biosynthesis. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 208 AA 
Protein Sequence
MFTPIDQAIE HFKQNKFVIV MDDAGRENEG DLICAAENVS TEQMAFLVRH SSGYVCAPMT 60
NAIADKLDLP LLRTGMKFES NDDDRHGTAY TITVDVAQGT TTGISAHDRS MTCRALADSS 120
STPKSFLKPG HICPLRAADG GVLQRRGHTE AGVDLCKLSG LSPVAVIGEL VNDDEQGTMM 180
RLNDCQAFGK KHGIPLISIE ELAQYLKK 208 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0005758; C:mitochondrial intermembrane space; IDA:SGD.
 GO:0008686; F:3,4-dihydroxy-2-butanone-4-phosphate synthase activity; IMP:SGD.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0009060; P:aerobic respiration; IMP:SGD.
 GO:0009231; P:riboflavin biosynthetic process; IMP:SGD. 
Interpro
 IPR017945; DHBP_synth_RibB-like_a/b_dom.
 IPR000422; DHBP_synthase_RibB. 
Pfam
 PF00926; DHBP_synthase 
SMART
  
PROSITE
  
PRINTS