CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005418
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RNA-binding protein SRO9 
Protein Synonyms/Alias
 Suppressor of RHO3 protein 9 
Gene Name
 SRO9 
Gene Synonyms/Alias
 YCL037C; YCL37C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
43LPTSSPWKLAPTEIPubiquitination[1]
73KNRTPTPKSSTATKWubiquitination[1]
79PKSSTATKWVPIKASacetylation[2]
79PKSSTATKWVPIKASubiquitination[1]
143KKQQQMKKDGFESAVacetylation[2]
156AVGEEDSKDATSQENubiquitination[1, 3]
229NNNNNRSKYHNHFHHacetylation[2]
290YLRSKLSKDGFAPLSacetylation[2]
301APLSLISKFYRVVNMubiquitination[1, 3]
342AEGTLAAKEGDNVTGubiquitination[3]
352DNVTGEAKEPSPLDKubiquitination[1, 3]
419ASQEQETKEDSAPVAubiquitination[3]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [3] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
 May overlap in function with tropomyosin and may be involved in organization of actin filaments. Acts as a multicopy suppressor of RHO3 mutation. RNA-binding protein which may modulate mRNA translation. Involved in heme regulation of HAP1, as a component of the high-molecular-weight complex (HMC). 
Sequence Annotation
 DOMAIN 255 351 HTH La-type RNA-binding.
 MOD_RES 55 55 Phosphoserine.
 MOD_RES 148 148 Phosphoserine.
 MOD_RES 422 422 Phosphoserine.  
Keyword
 Complete proteome; Cytoplasm; Direct protein sequencing; Phosphoprotein; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 434 AA 
Protein Sequence
MSAETAAANT ATAPVPEVQE QESSKSKQVN LTPAPLPTSS PWKLAPTEIP VSTISIEDLD 60
ATRKKKNRTP TPKSSTATKW VPIKASITVS GTKRSGSKNG ASNGNSNKSK NNKTAASSTS 120
SSNANRKKKH HQHNAKKQQQ MKKDGFESAV GEEDSKDATS QENGQSTQQQ QPPHHRNHHH 180
SHHHNSNGPQ RRKFHNSNNA GMPQNQGFPP QFKPYQGRNA RNNNNNRSKY HNHFHHNQQH 240
PQQPMVKLQQ QFYPVQPVLM AINNIARQIE YYFSEENLTV DNYLRSKLSK DGFAPLSLIS 300
KFYRVVNMSF GGDTNLILAA LREIVANEAA TVNVAEGTLA AKEGDNVTGE AKEPSPLDKY 360
FVRSKSWSNW LPETFETEIN IEKELVGDAL DQFMISLPPV PQQEEESSTE LASQEQETKE 420
DSAPVAAGES ESSL 434 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005844; C:polysome; IDA:SGD.
 GO:0003723; F:RNA binding; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IPI:SGD. 
Interpro
 IPR006630; Lupus_La_RNA-bd.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF05383; La 
SMART
 SM00715; LA 
PROSITE
 PS50961; HTH_LA 
PRINTS