CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035444
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Vps13b 
Protein Synonyms/Alias
  
Gene Name
 Vps13b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
3501SEFTFELKPARLYVEacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 3995 AA 
Protein Sequence
MLESYVTPIL MSYVNRYIKN LKPSDLQLSL WGGDVVLSKL ELKLDVLEQE LKLPFTFLSG 60
HIHELRIHVP WTKLGSEPVV ITINTMECIL KLKDGIQDDH ESCGSNSTNR STAENTKSST 120
KLRRIQQAAP TDPDLPPGYV QSLIRRVVNN VNIVINNLIL KYVEDDIVLS VNITSAECYT 180
VGELWDRAFM DISATDLVLR KAINFSDCTV CLDKRNASGK IEFYQDPLLY KCSFRTRLHF 240
TYDNLNSKMP SVIKIHTLVE SLKLSITDQQ LPMFIRIMQL GIALYYGEIG NFKDGETEDP 300
ACLSKDPLGN LTGTEDETRL DMQYPAPYKG QELYPQDYEE PQGWVSWAWS FVPAIVSYDD 360
GEEDYPGTDP ASTMHQQKAH TLKDPIVSVG FYCTKATVTF KLTEMQAENS YYSPQKVKSK 420
EVLCWEQEGT TIEALMMGEA FFDCQIGFVG CRAMCLKGIM GVKDFEEHMD RSETEACFFI 480
CGENLSTKGL TYLTNSLFDY RSPENNGTRA EFTLDAAHHK EIHTEIAGMQ RFGAFYMDYL 540
YTMEHSSGKG PSSQQDFPSG KNEDFGIVQE KSTKSLVIGP LDCRLDSSAV HRVLKMIVCA 600
MEHEYEPYSR LKPESKDEKE VVLNPEEVAS LEEYIPTRHT SVTLLKCTCT IFMAEFNLLD 660
RLLPVIMGGK NASHFTNATN FQSLRPLPSI QILVDKINLE HSVPMYAEQL VHVVSSLTQP 720
SDNLLHYCYV HCYLKVFGFQ AGLTCLEQSG SHCLPAPIVP SFSTALYGKR LKLPALWTKR 780
SQTVVTEGIF ELPNLTIQAT RAQTLLLQAV YQSWFHSGNA SSSTVNEALM NEVFQTTGVK 840
SKNPLPTLEG SIQNVELKYC STSLVKCASG TLGSIKICAK APGDSGKEKL IPLLQGPSDT 900
RDLHSTKWLN ESRKPESLLA PDLIAFTIQV PQYMDYCHHS GAVFLCSVQG LAVNLDPILY 960
TWVIYQPHKR TSRHIQQQPV VAVPLVTSVN RRREDELSVG SAPLGKQQSY QASEYASSPI 1020
KTKTVTESRP LSVPVKAVMH IHEECRSPED KMKEFIAILW NAVKSLTLQL DVQSCCVFIP 1080
NDSLPSPSTI VSGDIPGTVR SWYHGQTSIP GTLVLCLPQI KIVSAGHKSM EPLQEIPFVI 1140
PRPILEEGDA FPWTISLHHF SIYTLLGKQV TLSLVEPMGC TSTLAVTSQQ LLPVGPEGRH 1200
SFVVCLHVDL ESLEIKCSNP QVQLIYELAD IMSKVWNKIQ KRGHLSPSSV YSDTMAGPVP 1260
GSPVRSSVGT APPDTSTCSP SADIGTTTEG DSIQAADDSP FSDSVTLEQT TSHIGGSSGR 1320
VSLWMQWVLP KVTVKLFAPD LEKKDTEVCM VSELEDLSAS IDVQDVYTKV KCKIESFSID 1380
HYQSRPGEGW QSGQFEGVFL QCKEKPVTTT KLLDGAHQQH GFLSLTYTKA VTKNVRHKLT 1440
SRSERRSFHK LSEGLMDGSP HFLHEILLSA QAFDIVLCFP LLNAIASIFY TKLPKTQREK 1500
RKSSGQPMRT HTLTSRNLPL IYINTSVIRI FVPQTEETQS SVTVNQAAKE DTMVLKVGSV 1560
SMAPQADNPL GRSVLRKDIY QRALNLGILR DPGSEIEDRQ YQIDLQSISI GTAQWDQLKP 1620
EKGSGTGGVP TESERNSQNP ALEWNMASSI QRHQERRAIL TPILTDFSVR ITGAPAIIFT 1680
KIISPENLHM EEVLVCGHSL EVNITTSLDF FLSVAQVQLL HQLVAANMTG SEPSAKATEI 1740
SKHEQKKADT FDAGTAETSS GCSGAQDSGI GSDSVRIRIV QIEQHSGASQ HRIARPSHQS 1800
SIVKNLNFIP FDIFITASRI SLMTYSSVAL PKCKLPEQKE GGKTGKSSLN LPEVDSDAAK 1860
PNQAYISMAT AEDPLSTSTS FSSGKKIRVL SLESLHASTR PSARQALGVT VVRQPGRRGT 1920
GDLELDLFLH LIVSQPSLLL SCHHRKQRME ISIFDATLKG VASDYKCADP GKTLPEASDY 1980
NIVWLQTVPG ETDSKSGIPP SLITLHIKDF LNGPADISLD VSKPLKANLS FTKLDQINHF 2040
LKKIKKAHSS AHSTETSASS DSMLNRDEPP VSKCYHGKLS KPKVYCDEAQ KTSFQENMWR 2100
VISCFQKVSV HTTQIVVSME TVPHPHKPCV LASLSNLNGS LSVKAAQKVF GASLGSSFLL 2160
NISDALLKTS LKERSRILIG PFSAAVNLEA KWCKHSGNPG PQQSIPKISM DLRGGLLQVF 2220
WGQEHLNCLA LLHELFDGYL KEEGKSEMPV PESAPQTPSP MEKAQAFKTE QSSDDLRTGI 2280
FQYIQDAEPL KLPGMNEVLF YNETEESPGM MLWRYPEPRV LTLIRITPVP FNTTEDPDIS 2340
TADLGDVLQV PCSLEYWDEL QKVFVAFQEF SLSESKVCEL QLPDINLVHD QKKLVSSDLW 2400
RIVLNNNQNT TDDQSSASES GSQSTCEPLV TPTALAACTR VDSCFTPWFV PSLCVSFQLA 2460
HLEFRLCHHL DQLGTASPQH LQPFVSDKNV PSELEYMIIS FREPNLYLQQ WNSAPVCREI 2520
RFSSQVDCKL LECRNVTMQS VVKPFGICGQ MALSSSGGQK LLDCTVILDS VLVNFGQHVV 2580
HSLSTAIQAW QQNKCPEVEE LVFSHFVICN DTQETLRFGQ VDTDENILLA SLHSHQYSWR 2640
SHKSPQLLHI CIEGWGNWRW SEPFVVDHTG TFIRTIQYKG RTASLIIKVR PLSGVQKQII 2700
ICGRQIICSY LSQSIELKVV QHYIGQDGQA VVREHFDCLT AKQKLPSYIL ENSELTELCV 2760
KAKGDEDWSR DVCLEPKAPE YSTVIQVPTS NSSIIYVWCT VLTLEPNSQV QQRMIVFSPL 2820
FIVRSHLPDP IITHLEKRSL GLRETQIIPG RGQENPLHSV EPDLVHHLTF QAREEYDPSD 2880
CAVPISTALI KQITTKIQPG STVNEMLDEF YGSEKSHEPT WPYSQKDSDR NEQLSQWDSP 2940
MRVRLSMWKP YVRTLLIELL PWALLINQSK WDLWLFEGEK IVLQVPAGKI IIPPNFQEAF 3000
QIGIYWANTN TVHKSLAIKL VHNLTSPKWK DGGNGEVVTL DEEAFVDAEI RLGAFPGHQK 3060
LCQFCISSMV QHGIQVIQIE DKTTVINNTP YEIFYKPHLS VSNPYSGKEH LHVPDSATFS 3120
ICPGGEHPDV KSSSLPCWDI MPDVGPSVLD TTILQKQILL GFSPVPGADS SQCWSLPAII 3180
RREFPRQSVA VPFGTLREDG FCTRAIALTY QEHFGVTYLT LSEDPSPRVV FHNRCPVTIL 3240
VKENIRDSPK FEVYCKKIPP ESSIHHELYH QIISYPDCKT KDLLPSLFLR VDTMEEMPAE 3300
WSDPVDINSQ GTQVVFLTGF GYVYVDIAQQ CGTVFIILAP EGKAGPIFTS ASRALERMVT 3360
FRMFITQLSL AVSDDLTHQA PSELLRLTLD NVFLHVSPCV PGVLPGEEPP SSFFQLYGVE 3420
VYCGDLQLDN QLYSKSSFHF AVLVCRGEKT EPAQYSKVHS LLVSSKDLED YKENCFIKLC 3480
LTVSEGKDFL LDVSEFTFEL KPARLYVEDT FVYYIKTLFD TYLPHSRLAG HHAQLRTGKQ 3540
LLPMQVTQHA KALVNPVKLR KLVIQPVSLL VSIHASLKLY IASDHTPLSF SVFERGPLFT 3600
TARQLVHALA MHYAAGALFR AGWVVGSLEI LGSPASLVRS IGNGISDFFR LPYEGLTRGP 3660
GAFVSGVSRG TTSFVRHISK GTLTSITNLA TSLARNMDRL SLDEEHYTRQ EEWRRQLPES 3720
LSEGLRQGLS RLGISLLGAV AGIVDQPMQN FQKTSETQAS AGHKAKGVIS GVGKGIMGVF 3780
TKPIGGAAEL VSQTGYGILH GAGLSQLPKQ RCQPTHLYAD QAPNSHVKYV WKMLQSLGRP 3840
EVHMALDVVL VRGSGQEHEG CLLLTSEVLF VVSISEDTQQ QAFPITEIDC AQDTKQKNLL 3900
TVQLKQPRVA CDVEIDGARE RLSEQQFNRL VDYIAKTSCH LAPSCSSMQT CAVVALEPPP 3960
ATVKTYRYLA DPHFAQVFIS KLTMVRNKAL RKGFL 3995 
Gene Ontology
  
Interpro
 IPR015412; Autophagy-rel_C.
 IPR026847; VPS13.
 IPR026854; VPS13A_N.
 IPR009543; VPSAP_dom. 
Pfam
 PF09333; ATG_C
 PF12624; Chorein_N
 PF06650; DUF1162 
SMART
  
PROSITE
  
PRINTS