CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021068
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Dihydropyrimidinase 
Protein Synonyms/Alias
 DHP; DHPase; Dihydropyrimidine amidohydrolase; Hydantoinase 
Gene Name
 Dpys 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
57RILDAAGKLVLPGGIubiquitination[1]
159DKGVNSFKMFMAYKGubiquitination[1]
256VMSKSAAKVVADARRacetylation[2]
256VMSKSAAKVVADARRphosphoglycerylation[3]
256VMSKSAAKVVADARRsuccinylation[2]
256VMSKSAAKVVADARRubiquitination[1]
339TCQKALGKDDFTKIPubiquitination[1]
344LGKDDFTKIPNGVNGacetylation[4]
344LGKDDFTKIPNGVNGubiquitination[1]
362RMSVIWEKGVHSGKMubiquitination[1]
384VTSTNAAKIFNLYPKubiquitination[1]
391KIFNLYPKKGRIAVGubiquitination[1]
489TCTPVPVKRAPYKGEubiquitination[1]
494PVKRAPYKGEVTTLKubiquitination[1]
501KGEVTTLKARETKEDubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [3] Functional lysine modification by an intrinsically reactive primary glycolytic metabolite.
 Moellering RE, Cravatt BF.
 Science. 2013 Aug 2;341(6145):549-53. [PMID: 23908237]
 [4] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Catalyzes the second step of the reductive pyrimidine degradation, the reversible hydrolytic ring opening of dihydropyrimidines. Can catalyze the ring opening of 5,6- dihydrouracil to N-carbamyl-alanine and of 5,6-dihydrothymine to N-carbamyl-amino isobutyrate (By similarity). 
Sequence Annotation
 METAL 67 67 Zinc 1 (By similarity).
 METAL 69 69 Zinc 1 (By similarity).
 METAL 159 159 Zinc 1; via carbamate group (By
 METAL 159 159 Zinc 2; via carbamate group (By
 METAL 192 192 Zinc 2 (By similarity).
 METAL 248 248 Zinc 2 (By similarity).
 METAL 326 326 Zinc 1 (By similarity).
 BINDING 164 164 Substrate (By similarity).
 BINDING 347 347 Substrate; via carbonyl oxygen (By
 MOD_RES 159 159 N6-carboxylysine (By similarity).  
Keyword
 Complete proteome; Hydrolase; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 519 AA 
Protein Sequence
MAPQGRLLIR GGRIVNDDFS QVADVLVEDG VVRALGRDLL PPEDASRGLR ILDAAGKLVL 60
PGGIDTHTHM QFPFMGSQSV DDFYQGTKAA LAGGTTMIID FAIPQKGSSL IEAFETWRNW 120
ADPKVCCDYS LHVAVTWWSD KVKEEMKTLA RDKGVNSFKM FMAYKGLYMV QDEQLYAAFS 180
QCKEIGAIAQ VHAENGDLIA EGAKKMLALG ITGPEGHELC RPEAVEAEAT LRAITIASAV 240
NCPLYVVHVM SKSAAKVVAD ARRAGNVVYG EPIAAGLGTD GRQYWSEEWS HAAHHVMGPP 300
LRPDPLTPGF LMDLLANGDL TTTGSDNCTF NTCQKALGKD DFTKIPNGVN GVEDRMSVIW 360
EKGVHSGKMD ENRFVAVTST NAAKIFNLYP KKGRIAVGSD ADIVIWDPEA TRRISAKTHH 420
QAVNFNIFEG MVCHGVPLVT ISRGRVVYEA GVFNVTAGHG KFIPRQPFAE YIYKRIKQRD 480
QTCTPVPVKR APYKGEVTTL KARETKEDDT AGTRMQGHS 519 
Gene Ontology
 GO:0005829; C:cytosol; ISS:BHF-UCL.
 GO:0016597; F:amino acid binding; ISS:BHF-UCL.
 GO:0004157; F:dihydropyrimidinase activity; ISS:BHF-UCL.
 GO:0002059; F:thymine binding; ISS:BHF-UCL.
 GO:0002058; F:uracil binding; ISS:BHF-UCL.
 GO:0008270; F:zinc ion binding; ISS:BHF-UCL.
 GO:0019482; P:beta-alanine metabolic process; ISS:BHF-UCL.
 GO:0051289; P:protein homotetramerization; ISS:BHF-UCL.
 GO:0006210; P:thymine catabolic process; ISS:BHF-UCL.
 GO:0006212; P:uracil catabolic process; ISS:BHF-UCL. 
Interpro
 IPR006680; Amidohydro_1.
 IPR011778; Hydantoinase/dihydroPyrase.
 IPR011059; Metal-dep_hydrolase_composite. 
Pfam
 PF01979; Amidohydro_1 
SMART
  
PROSITE
  
PRINTS