CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014366
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ATP-dependent RNA helicase DDX19A 
Protein Synonyms/Alias
 DEAD box RNA helicase DEAD5; mDEAD5; DEAD box protein 19A; Eukaryotic translation initiation factor 4A-related sequence 1 
Gene Name
 Ddx19a 
Gene Synonyms/Alias
 Ddx19; Eif4a-rs1 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
63AAQSLLNKLIRSNLVacetylation[1]
63AAQSLLNKLIRSNLVubiquitination[2]
286SVWKFAQKVVPDPNIubiquitination[2]
343MIFCHTRKTASWLAAacetylation[1]
445AVNMVDSKHSMNILNubiquitination[2]
Reference
 [1] Quantitative acetylome analysis reveals the roles of SIRT1 in regulating diverse substrates and cellular pathways.
 Chen Y, Zhao W, Yang JS, Cheng Z, Luo H, Lu Z, Tan M, Gu W, Zhao Y.
 Mol Cell Proteomics. 2012 Oct;11(10):1048-62. [PMID: 22826441]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 ATP-dependent RNA helicase involved in mRNA export from the nucleus. Rather than unwinding RNA duplexes, DDX19 functions as a remodeler of ribonucleoprotein particles, whereby proteins bound to nuclear mRNA are dissociated and replaced by cytoplasmic mRNA binding proteins (By similarity). 
Sequence Annotation
 DOMAIN 124 294 Helicase ATP-binding.
 DOMAIN 305 473 Helicase C-terminal.
 NP_BIND 137 144 ATP (By similarity).
 REGION 2 299 N-terminal lobe (By similarity).
 REGION 54 67 N-terminal helix (By similarity).
 REGION 300 478 C-terminal lobe (By similarity).
 MOTIF 91 119 Q motif.
 MOTIF 241 244 DEAD box.
 BINDING 118 118 ATP (By similarity).
 BINDING 428 428 ATP (By similarity).
 BINDING 431 431 ATP (By similarity).
 MOD_RES 2 2 N-acetylalanine (By similarity).  
Keyword
 Acetylation; ATP-binding; Complete proteome; Cytoplasm; Helicase; Hydrolase; Membrane; mRNA transport; Nuclear pore complex; Nucleotide-binding; Nucleus; Protein transport; Reference proteome; RNA-binding; Translocation; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 478 AA 
Protein Sequence
MATDSWALAV DEQEAAVKSM SSLQIKEEKV KADTNGVIKT STTAEKTEEE EKEDRAAQSL 60
LNKLIRSNLV DNTNQVEVLQ RDPSSPLYSV KSFEELRLKP QLLQGVYAMG FNRPSKIQEN 120
ALPMMLAEPP QNLIAQSQSG TGKTAAFVLA MLSRVEPADR YPQCLCLSPT YELALQTGKV 180
IEQMGKFHPE LKLAYAVRGN KLERGQKVSE QIVIGTPGTV LDWCSKLKFI DPKKIKVFVL 240
DEADVMIATQ GHQDQSIRIQ RMLPRNCQML LFSATFEDSV WKFAQKVVPD PNIIKLKREE 300
ETLDTIKQYY VLCNNREEKF QALCNLYGAI TIAQAMIFCH TRKTASWLAA ELSKEGHQVA 360
LLSGEMMVEQ RAAVIERFRE GKEKVLVTTN VCARGIDVEQ VSVVINFDLP VDKDGNPDNE 420
TYLHRIGRTG RFGKRGLAVN MVDSKHSMNI LNRIQEHFNK KIERLDTDDL DEIEKIAN 478 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
 GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006917; P:induction of apoptosis; IEA:Compara.
 GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0010043; P:response to zinc ion; IEA:Compara. 
Interpro
 IPR011545; DNA/RNA_helicase_DEAD/DEAH_N.
 IPR014001; Helicase_ATP-bd.
 IPR001650; Helicase_C.
 IPR027417; P-loop_NTPase.
 IPR014014; RNA_helicase_DEAD_Q_motif. 
Pfam
 PF00270; DEAD
 PF00271; Helicase_C 
SMART
 SM00487; DEXDc
 SM00490; HELICc 
PROSITE
 PS00039; DEAD_ATP_HELICASE
 PS51192; HELICASE_ATP_BIND_1
 PS51194; HELICASE_CTER
 PS51195; Q_MOTIF 
PRINTS