CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003567
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcriptional regulatory protein GlrR 
Protein Synonyms/Alias
  
Gene Name
 glrR 
Gene Synonyms/Alias
 yfhA; b2554; JW2538 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
110FLTKPVDKDALYQAIacetylation[1]
430RNRTEFYKLLSRHELacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Member of the two-component regulatory system GlrR/GlrK that up-regulates transcription of the glmY sRNA when cells enter the stationary growth phase. Regulates glmY transcription by binding to three conserved sites in the purL-glmY intergenic region. 
Sequence Annotation
 DOMAIN 7 121 Response regulatory.
 DOMAIN 136 366 Sigma-54 factor interaction (Potential).
 NP_BIND 164 171 ATP (Potential).
 NP_BIND 227 236 ATP (Potential).
 DNA_BIND 414 433 H-T-H motif (Potential).
 MOD_RES 56 56 4-aspartylphosphate (By similarity).  
Keyword
 ATP-binding; Complete proteome; Cytoplasm; DNA-binding; Nucleotide-binding; Phosphoprotein; Reference proteome; Transcription; Transcription regulation; Two-component regulatory system. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 444 AA 
Protein Sequence
MSHKPAHLLL VDDDPGLLKL LGLRLTSEGY SVVTAESGAE GLRVLNREKV DLVISDLRMD 60
EMDGMQLFAE IQKVQPGMPV IILTAHGSIP DAVAATQQGV FSFLTKPVDK DALYQAIDDA 120
LEQSAPATDE RWREAIVTRS PLMLRLLEQA RLVAQSDVSV LINGQSGTGK EIFAQAIHNA 180
SPRNSKPFIA INCGALPEQL LESELFGHAR GAFTGAVSNR EGLFQAAEGG TLFLDEIGDM 240
PAPLQVKLLR VLQERKVRPL GSNRDIDINV RIISATHRDL PKAMARGEFR EDLYYRLNVV 300
SLKIPALAER TEDIPLLANH LLRQAAERHK PFVRAFSTDA MKRLMTASWP GNVRQLVNVI 360
EQCVALTSSP VISDALVEQA LEGENTALPT FVEARNQFEL NYLRKLLQIT KGNVTHAARM 420
AGRNRTEFYK LLSRHELDAN DFKE 444 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0000156; F:phosphorelay response regulator activity; IMP:EcoCyc.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEP:EcoCyc.
 GO:0006351; P:transcription, DNA-dependent; IDA:EcoCyc. 
Interpro
 IPR003593; AAA+_ATPase.
 IPR011006; CheY-like_superfamily.
 IPR009057; Homeodomain-like.
 IPR027417; P-loop_NTPase.
 IPR001789; Sig_transdc_resp-reg_receiver.
 IPR002078; Sigma_54_int.
 IPR025662; Sigma_54_int_dom_ATP-bd_1.
 IPR025943; Sigma_54_int_dom_ATP-bd_2.
 IPR025944; Sigma_54_int_dom_CS. 
Pfam
 PF00072; Response_reg
 PF00158; Sigma54_activat 
SMART
 SM00382; AAA
 SM00448; REC 
PROSITE
 PS50110; RESPONSE_REGULATORY
 PS00675; SIGMA54_INTERACT_1
 PS00676; SIGMA54_INTERACT_2
 PS00688; SIGMA54_INTERACT_3
 PS50045; SIGMA54_INTERACT_4 
PRINTS