CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011132
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 NEDD8-like protein RUB1 
Protein Synonyms/Alias
 Ubiquitin-like protein RUB1 
Gene Name
 RUB1 
Gene Synonyms/Alias
 YDR139C; YD9302.15C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
11KVKTLTGKEISVELKubiquitination[1]
48QRLIFQGKQIDDKLTubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Has a role in regulating ubiquitin conjugation pathways. Acts directly on CDC53 and other cullin proteins. 
Sequence Annotation
 DOMAIN 1 74 Ubiquitin-like.  
Keyword
 Complete proteome; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 77 AA 
Protein Sequence
MIVKVKTLTG KEISVELKES DLVYHIKELL EEKEGIPPSQ QRLIFQGKQI DDKLTVTDAH 60
LVEGMQLHLV LTLRGGN 77 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0031386; F:protein tag; IDA:SGD.
 GO:0045116; P:protein neddylation; IDA:SGD. 
Interpro
 IPR000626; Ubiquitin.
 IPR019954; Ubiquitin_CS.
 IPR019956; Ubiquitin_subgr.
 IPR019955; Ubiquitin_supergroup. 
Pfam
 PF00240; ubiquitin 
SMART
 SM00213; UBQ 
PROSITE
 PS00299; UBIQUITIN_1
 PS50053; UBIQUITIN_2 
PRINTS
 PR00348; UBIQUITIN.