CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012564
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein phosphatase 1 regulatory subunit 7 
Protein Synonyms/Alias
 Protein phosphatase 1 regulatory subunit 22 
Gene Name
 PPP1R7 
Gene Synonyms/Alias
 SDS22 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
90LNHYRIGKIEGFEVLubiquitination[1, 2, 3]
98IEGFEVLKKVKTLCLubiquitination[3]
99EGFEVLKKVKTLCLRubiquitination[3]
101FEVLKKVKTLCLRQNubiquitination[3, 4, 5]
111CLRQNLIKCIENLEEubiquitination[3]
133DLYDNQIKKIENLEAubiquitination[1, 3]
162RNIEGVDKLTRLKKLubiquitination[1, 3]
167VDKLTRLKKLFLVNNubiquitination[3]
168DKLTRLKKLFLVNNKubiquitination[3, 4, 5]
175KLFLVNNKISKIENLubiquitination[3, 4, 5, 6]
178LVNNKISKIENLSNLubiquitination[3, 4, 5]
217LESLFLGKNKITKLQubiquitination[1, 3, 4, 5, 6]
219SLFLGKNKITKLQNLubiquitination[3]
222LGKNKITKLQNLDALubiquitination[1, 3, 4, 5]
244MQSNRLTKIEGLQNLubiquitination[1, 2, 3, 4, 5, 6]
335LERNPLQKDPQYRRKubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789]
 [6] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724
Functional Description
 Regulatory subunit of protein phosphatase 1 (By similarity). 
Sequence Annotation
 REPEAT 77 98 LRR 1.
 REPEAT 99 120 LRR 2.
 REPEAT 121 142 LRR 3.
 REPEAT 143 164 LRR 4.
 REPEAT 165 186 LRR 5.
 REPEAT 187 208 LRR 6.
 REPEAT 209 230 LRR 7.
 REPEAT 231 252 LRR 8.
 REPEAT 253 274 LRR 9.
 REPEAT 275 296 LRR 10.
 REPEAT 297 318 LRR 11.
 DOMAIN 331 360 LRRCT.
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 12 12 Phosphoserine.
 MOD_RES 24 24 Phosphoserine.
 MOD_RES 27 27 Phosphoserine.
 MOD_RES 44 44 Phosphoserine.
 MOD_RES 47 47 Phosphoserine.  
Keyword
 Acetylation; Alternative splicing; Complete proteome; Leucine-rich repeat; Nucleus; Phosphoprotein; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 360 AA 
Protein Sequence
MAAERGAGQQ QSQEMMEVDR RVESEESGDE EGKKHSSGIV ADLSEQSLKD GEERGEEDPE 60
EEHELPVDME TINLDRDAED VDLNHYRIGK IEGFEVLKKV KTLCLRQNLI KCIENLEELQ 120
SLRELDLYDN QIKKIENLEA LTELEILDIS FNLLRNIEGV DKLTRLKKLF LVNNKISKIE 180
NLSNLHQLQM LELGSNRIRA IENIDTLTNL ESLFLGKNKI TKLQNLDALT NLTVLSMQSN 240
RLTKIEGLQN LVNLRELYLS HNGIEVIEGL ENNNKLTMLD IASNRIKKIE NISHLTELQE 300
FWMNDNLLES WSDLDELKGA RSLETVYLER NPLQKDPQYR RKVMLALPSV RQIDATFVRF 360 
Gene Ontology
 GO:0005737; C:cytoplasm; TAS:ProtInc.
 GO:0005634; C:nucleus; TAS:ProtInc.
 GO:0008599; F:protein phosphatase type 1 regulator activity; TAS:ProtInc. 
Interpro
 IPR001611; Leu-rich_rpt.
 IPR025875; Leu-rich_rpt_4.
 IPR003603; U2A'_phosphoprotein32A_C. 
Pfam
 PF12799; LRR_4 
SMART
 SM00446; LRRcap 
PROSITE
 PS51450; LRR 
PRINTS