CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005534
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Replication factor A protein 2 
Protein Synonyms/Alias
 RF-A protein 2; DNA-binding protein BUF1; Replication protein A 36 kDa subunit 
Gene Name
 RFA2 
Gene Synonyms/Alias
 BUF1; YNL312W; N0368 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
100TGQIEVRKWSEDANDubiquitination[1]
141VKVFGALKEFGGKKNacetylation[2]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Binds to single-stranded sequences participating in DNA replication in addition to those mediating transcriptional repression (URS1) and activation (CAR1). Stimulates the activity of a cognate strand exchange protein (SEP1). It cooperates with T- AG and DNA topoisomerase I to unwind template DNA containing the simian virus 40 origin of DNA replication. 
Sequence Annotation
 MOD_RES 27 27 Phosphoserine.
 MOD_RES 122 122 Phosphoserine.  
Keyword
 Complete proteome; Direct protein sequencing; DNA replication; Nucleus; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 273 AA 
Protein Sequence
MATYQPYNEY SSVTGGGFEN SESRPGSGES ETNTRVNTLT PVTIKQILES KQDIQDGPFV 60
SHNQELHHVC FVGVVRNITD HTANIFLTIE DGTGQIEVRK WSEDANDLAA GNDDSSGKGY 120
GSQVAQQFEI GGYVKVFGAL KEFGGKKNIQ YAVIKPIDSF NEVLTHHLEV IKCHSIASGM 180
MKQPLESASN NNGQSLFVKD DNDTSSGSSP LQRILEFCKK QCEGKDANSF AVPIPLISQS 240
LNLDETTVRN CCTTLTDQGF IYPTFDDNNF FAL 273 
Gene Ontology
 GO:0000781; C:chromosome, telomeric region; IMP:SGD.
 GO:0000794; C:condensed nuclear chromosome; IDA:SGD.
 GO:0005662; C:DNA replication factor A complex; IDA:SGD.
 GO:0003690; F:double-stranded DNA binding; IDA:SGD.
 GO:0043565; F:sequence-specific DNA binding; IDA:SGD.
 GO:0003697; F:single-stranded DNA binding; IDA:SGD.
 GO:0006268; P:DNA unwinding involved in replication; IDA:SGD.
 GO:0000724; P:double-strand break repair via homologous recombination; IGI:SGD.
 GO:0045184; P:establishment of protein localization; IMP:SGD.
 GO:0030491; P:heteroduplex formation; IDA:SGD.
 GO:0006289; P:nucleotide-excision repair; IMP:SGD.
 GO:0016567; P:protein ubiquitination; IPI:SGD.
 GO:0007131; P:reciprocal meiotic recombination; IPI:SGD.
 GO:0000722; P:telomere maintenance via recombination; IPI:SGD.
 GO:0007004; P:telomere maintenance via telomerase; IMP:SGD. 
Interpro
 IPR012340; NA-bd_OB-fold.
 IPR004365; NA-bd_OB_tRNA-helicase.
 IPR014646; RPA32.
 IPR014892; RPA_C.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF08784; RPA_C
 PF01336; tRNA_anti 
SMART
  
PROSITE
  
PRINTS