CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023599
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 HIG1 domain family member 1A, mitochondrial 
Protein Synonyms/Alias
 Hypoxia-inducible gene 1 protein; RCF1 homolog A; RCF1a 
Gene Name
 HIGD1A 
Gene Synonyms/Alias
 HIG1; HSPC010 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
19YEEDQGSKLIRKAKEubiquitination[1]
90MYREFWAKPKP****ubiquitination[2]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Proposed subunit of cytochrome c oxidase (COX, complex IV), which is the terminal component of the mitochondrial respiratory chain that catalyzes the reduction of oxygen to water. May play a role in the assembly of respiratory supercomplexes. 
Sequence Annotation
 DOMAIN 1 93 HIG1.
 MOD_RES 2 2 N-acetylserine.  
Keyword
 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Electron transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Respiratory chain; Stress response; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 93 AA 
Protein Sequence
MSTDTGVSLP SYEEDQGSKL IRKAKEAPFV PVGIAGFAAI VAYGLYKLKS RGNTKMSIHL 60
IHMRVAAQGF VVGAMTVGMG YSMYREFWAK PKP 93 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
 GO:0043234; C:protein complex; IDA:LIFEdb.
 GO:0070469; C:respiratory chain; IEA:UniProtKB-KW.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0043066; P:negative regulation of apoptotic process; IDA:MGI.
 GO:0006950; P:response to stress; IEA:UniProtKB-KW. 
Interpro
 IPR007667; Hypoxia_induced_domain. 
Pfam
 PF04588; HIG_1_N 
SMART
  
PROSITE
 PS51503; HIG1 
PRINTS