CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005989
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 HTH-type transcriptional regulator YidZ 
Protein Synonyms/Alias
  
Gene Name
 yidZ 
Gene Synonyms/Alias
 b3711; JW3689 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
129RYPQATIKLRNWDYDacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Involved in anaerobic NO protection. 
Sequence Annotation
 DOMAIN 8 65 HTH lysR-type.
 DNA_BIND 25 44 H-T-H motif (By similarity).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 319 AA 
Protein Sequence
MKKSITTLDL NLLLCLQLLM QERSVTKAAK RINVTPSAVS KSLAKLRAWF DDPLFVNSPL 60
GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE LAAESPLMMI MLNALSKQIY 120
QRYPQATIKL RNWDYDSLDA ITRGEVDIGF SGRESHPRSR ELLSSLPLAI DYEVLFSDVP 180
CVWLRKDHPA LHQTWNLDTF LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ 240
SLFMAAQPDN LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSH 300
NPKIVWLRET IKNLYASMA 319 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:HAMAP.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:HAMAP.
 GO:0006351; P:transcription, DNA-dependent; IMP:EcoCyc. 
Interpro
 IPR005119; LysR_subst-bd.
 IPR000847; Tscrpt_reg_HTH_LysR.
 IPR023746; Tscrpt_reg_YidZ.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00126; HTH_1
 PF03466; LysR_substrate 
SMART
  
PROSITE
 PS50931; HTH_LYSR 
PRINTS